Protein–RNA interactions for Protein: Q6ZMN8

CCNI2, Cyclin-I2, humanhuman

Predicted RBP Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNI2Q6ZMN8 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC21.12■□□□□ 0.97
CCNI2Q6ZMN8 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCNI2Q6ZMN8 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21.12■□□□□ 0.97
CCNI2Q6ZMN8 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.12■□□□□ 0.97
CCNI2Q6ZMN8 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCNI2Q6ZMN8 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCNI2Q6ZMN8 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCNI2Q6ZMN8 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCNI2Q6ZMN8 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCNI2Q6ZMN8 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.11■□□□□ 0.97
CCNI2Q6ZMN8 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC21.11■□□□□ 0.97
CCNI2Q6ZMN8 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCNI2Q6ZMN8 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.11■□□□□ 0.97
CCNI2Q6ZMN8 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCNI2Q6ZMN8 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCNI2Q6ZMN8 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCNI2Q6ZMN8 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.11■□□□□ 0.97
CCNI2Q6ZMN8 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.11■□□□□ 0.97
CCNI2Q6ZMN8 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.11■□□□□ 0.97
CCNI2Q6ZMN8 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.11■□□□□ 0.97
CCNI2Q6ZMN8 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCNI2Q6ZMN8 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCNI2Q6ZMN8 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC21.11■□□□□ 0.97
CCNI2Q6ZMN8 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC21.11■□□□□ 0.97
CCNI2Q6ZMN8 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.11■□□□□ 0.97
CCNI2Q6ZMN8 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
CCNI2Q6ZMN8 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
CCNI2Q6ZMN8 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCNI2Q6ZMN8 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCNI2Q6ZMN8 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCNI2Q6ZMN8 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCNI2Q6ZMN8 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCNI2Q6ZMN8 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCNI2Q6ZMN8 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCNI2Q6ZMN8 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCNI2Q6ZMN8 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.1■□□□□ 0.97
CCNI2Q6ZMN8 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCNI2Q6ZMN8 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CCNI2Q6ZMN8 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCNI2Q6ZMN8 GUSBP6-202ENST00000438529 1198 ntBASIC21.1■□□□□ 0.97
CCNI2Q6ZMN8 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.1■□□□□ 0.97
CCNI2Q6ZMN8 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.1■□□□□ 0.97
CCNI2Q6ZMN8 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.1■□□□□ 0.97
CCNI2Q6ZMN8 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCNI2Q6ZMN8 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CCNI2Q6ZMN8 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCNI2Q6ZMN8 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCNI2Q6ZMN8 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCNI2Q6ZMN8 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCNI2Q6ZMN8 TMEM179-206ENST00000616017 1645 ntBASIC21.1■□□□□ 0.97
CCNI2Q6ZMN8 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCNI2Q6ZMN8 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCNI2Q6ZMN8 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCNI2Q6ZMN8 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCNI2Q6ZMN8 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.1■□□□□ 0.97
CCNI2Q6ZMN8 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCNI2Q6ZMN8 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCNI2Q6ZMN8 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.1■□□□□ 0.97
CCNI2Q6ZMN8 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCNI2Q6ZMN8 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCNI2Q6ZMN8 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCNI2Q6ZMN8 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCNI2Q6ZMN8 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCNI2Q6ZMN8 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCNI2Q6ZMN8 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCNI2Q6ZMN8 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCNI2Q6ZMN8 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCNI2Q6ZMN8 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC21.09■□□□□ 0.97
CCNI2Q6ZMN8 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCNI2Q6ZMN8 SLC7A5P2-201ENST00000553010 536 ntBASIC21.09■□□□□ 0.97
CCNI2Q6ZMN8 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.09■□□□□ 0.97
CCNI2Q6ZMN8 MFSD11-216ENST00000590393 1141 ntBASIC21.09■□□□□ 0.97
CCNI2Q6ZMN8 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.09■□□□□ 0.97
CCNI2Q6ZMN8 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCNI2Q6ZMN8 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.09■□□□□ 0.97
CCNI2Q6ZMN8 AC009237.3-201ENST00000393279 1427 ntBASIC21.09■□□□□ 0.97
CCNI2Q6ZMN8 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCNI2Q6ZMN8 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
CCNI2Q6ZMN8 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CCNI2Q6ZMN8 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
CCNI2Q6ZMN8 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCNI2Q6ZMN8 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.08■□□□□ 0.97
CCNI2Q6ZMN8 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CCNI2Q6ZMN8 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCNI2Q6ZMN8 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.08■□□□□ 0.97
CCNI2Q6ZMN8 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CCNI2Q6ZMN8 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCNI2Q6ZMN8 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC21.08■□□□□ 0.97
CCNI2Q6ZMN8 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.08■□□□□ 0.97
CCNI2Q6ZMN8 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
CCNI2Q6ZMN8 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.08■□□□□ 0.97
CCNI2Q6ZMN8 AL138781.1-201ENST00000566567 1274 ntBASIC21.08■□□□□ 0.97
CCNI2Q6ZMN8 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.08■□□□□ 0.97
CCNI2Q6ZMN8 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCNI2Q6ZMN8 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCNI2Q6ZMN8 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.08■□□□□ 0.96
CCNI2Q6ZMN8 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCNI2Q6ZMN8 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCNI2Q6ZMN8 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCNI2Q6ZMN8 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms