Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
TMEM53Q6P2H8 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.2■□□□□ 0.5
TMEM53Q6P2H8 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TMEM53Q6P2H8 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.2■□□□□ 0.5
TMEM53Q6P2H8 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.2■□□□□ 0.5
TMEM53Q6P2H8 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.2■□□□□ 0.5
TMEM53Q6P2H8 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.2■□□□□ 0.5
TMEM53Q6P2H8 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.2■□□□□ 0.5
TMEM53Q6P2H8 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM53Q6P2H8 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM53Q6P2H8 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM53Q6P2H8 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.2■□□□□ 0.5
TMEM53Q6P2H8 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM53Q6P2H8 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM53Q6P2H8 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM53Q6P2H8 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
TMEM53Q6P2H8 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM53Q6P2H8 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM53Q6P2H8 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.2■□□□□ 0.5
TMEM53Q6P2H8 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TMEM53Q6P2H8 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM53Q6P2H8 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM53Q6P2H8 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM53Q6P2H8 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM53Q6P2H8 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.19■□□□□ 0.5
TMEM53Q6P2H8 AC011270.2-201ENST00000624293 2550 ntBASIC18.19■□□□□ 0.5
TMEM53Q6P2H8 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM53Q6P2H8 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM53Q6P2H8 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM53Q6P2H8 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TMEM53Q6P2H8 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TMEM53Q6P2H8 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM53Q6P2H8 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.19■□□□□ 0.5
TMEM53Q6P2H8 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM53Q6P2H8 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.19■□□□□ 0.5
TMEM53Q6P2H8 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.19■□□□□ 0.5
TMEM53Q6P2H8 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TMEM53Q6P2H8 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.19■□□□□ 0.5
TMEM53Q6P2H8 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM53Q6P2H8 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM53Q6P2H8 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.19■□□□□ 0.5
TMEM53Q6P2H8 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM53Q6P2H8 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM53Q6P2H8 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.19■□□□□ 0.5
TMEM53Q6P2H8 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM53Q6P2H8 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM53Q6P2H8 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.19■□□□□ 0.5
TMEM53Q6P2H8 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.18■□□□□ 0.5
TMEM53Q6P2H8 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM53Q6P2H8 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM53Q6P2H8 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM53Q6P2H8 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM53Q6P2H8 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM53Q6P2H8 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.18■□□□□ 0.5
TMEM53Q6P2H8 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM53Q6P2H8 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM53Q6P2H8 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM53Q6P2H8 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.18■□□□□ 0.5
TMEM53Q6P2H8 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.18■□□□□ 0.5
TMEM53Q6P2H8 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.18■□□□□ 0.5
TMEM53Q6P2H8 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.18■□□□□ 0.5
TMEM53Q6P2H8 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.18■□□□□ 0.5
TMEM53Q6P2H8 AC022517.1-201ENST00000592429 346 ntBASIC18.18■□□□□ 0.5
TMEM53Q6P2H8 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.18■□□□□ 0.5
TMEM53Q6P2H8 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM53Q6P2H8 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM53Q6P2H8 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM53Q6P2H8 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.18■□□□□ 0.5
TMEM53Q6P2H8 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.18■□□□□ 0.5
TMEM53Q6P2H8 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM53Q6P2H8 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM53Q6P2H8 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM53Q6P2H8 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.18■□□□□ 0.5
TMEM53Q6P2H8 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.18■□□□□ 0.5
TMEM53Q6P2H8 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
TMEM53Q6P2H8 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.17■□□□□ 0.5
TMEM53Q6P2H8 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM53Q6P2H8 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM53Q6P2H8 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM53Q6P2H8 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
TMEM53Q6P2H8 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM53Q6P2H8 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM53Q6P2H8 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TMEM53Q6P2H8 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.17■□□□□ 0.5
TMEM53Q6P2H8 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
TMEM53Q6P2H8 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.17■□□□□ 0.5
TMEM53Q6P2H8 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.17■□□□□ 0.5
TMEM53Q6P2H8 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM53Q6P2H8 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM53Q6P2H8 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM53Q6P2H8 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.17■□□□□ 0.5
TMEM53Q6P2H8 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM53Q6P2H8 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.17■□□□□ 0.5
TMEM53Q6P2H8 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM53Q6P2H8 AL139384.1-201ENST00000612143 3047 ntBASIC18.17■□□□□ 0.5
TMEM53Q6P2H8 AL049796.1-201ENST00000565336 1766 ntBASIC18.17■□□□□ 0.5
TMEM53Q6P2H8 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM53Q6P2H8 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM53Q6P2H8 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM53Q6P2H8 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms