Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDCD4Q53EL6 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDCD4Q53EL6 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
PDCD4Q53EL6 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDCD4Q53EL6 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PDCD4Q53EL6 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PDCD4Q53EL6 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PDCD4Q53EL6 KRT19P1-201ENST00000405746 1186 ntBASIC19.17■□□□□ 0.66
PDCD4Q53EL6 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDCD4Q53EL6 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.17■□□□□ 0.66
PDCD4Q53EL6 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.17■□□□□ 0.66
PDCD4Q53EL6 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.17■□□□□ 0.66
PDCD4Q53EL6 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.17■□□□□ 0.66
PDCD4Q53EL6 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDCD4Q53EL6 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDCD4Q53EL6 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDCD4Q53EL6 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
PDCD4Q53EL6 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDCD4Q53EL6 AC098818.2-201ENST00000564925 2320 ntBASIC19.17■□□□□ 0.66
PDCD4Q53EL6 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
PDCD4Q53EL6 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDCD4Q53EL6 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
PDCD4Q53EL6 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PDCD4Q53EL6 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDCD4Q53EL6 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDCD4Q53EL6 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PDCD4Q53EL6 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PDCD4Q53EL6 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.16■□□□□ 0.66
PDCD4Q53EL6 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.16■□□□□ 0.66
PDCD4Q53EL6 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PDCD4Q53EL6 UBE2DNL-204ENST00000602536 740 ntBASIC19.16■□□□□ 0.66
PDCD4Q53EL6 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDCD4Q53EL6 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.16■□□□□ 0.66
PDCD4Q53EL6 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
PDCD4Q53EL6 AC093484.2-201ENST00000580996 2166 ntBASIC19.16■□□□□ 0.66
PDCD4Q53EL6 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDCD4Q53EL6 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PDCD4Q53EL6 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDCD4Q53EL6 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDCD4Q53EL6 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDCD4Q53EL6 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
PDCD4Q53EL6 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PDCD4Q53EL6 AC009237.14-201ENST00000609975 1594 ntBASIC19.15■□□□□ 0.66
PDCD4Q53EL6 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PDCD4Q53EL6 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.15■□□□□ 0.66
PDCD4Q53EL6 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDCD4Q53EL6 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
PDCD4Q53EL6 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDCD4Q53EL6 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PDCD4Q53EL6 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PDCD4Q53EL6 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDCD4Q53EL6 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDCD4Q53EL6 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDCD4Q53EL6 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDCD4Q53EL6 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PDCD4Q53EL6 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.15■□□□□ 0.66
PDCD4Q53EL6 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.15■□□□□ 0.66
PDCD4Q53EL6 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.15■□□□□ 0.66
PDCD4Q53EL6 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PDCD4Q53EL6 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.15■□□□□ 0.66
PDCD4Q53EL6 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.15■□□□□ 0.66
PDCD4Q53EL6 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.15■□□□□ 0.66
PDCD4Q53EL6 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.15■□□□□ 0.66
PDCD4Q53EL6 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PDCD4Q53EL6 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDCD4Q53EL6 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PDCD4Q53EL6 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PDCD4Q53EL6 CYP21A1P-202ENST00000354927 1481 ntBASIC19.15■□□□□ 0.66
PDCD4Q53EL6 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDCD4Q53EL6 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDCD4Q53EL6 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PDCD4Q53EL6 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PDCD4Q53EL6 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.14■□□□□ 0.66
PDCD4Q53EL6 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.14■□□□□ 0.66
PDCD4Q53EL6 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PDCD4Q53EL6 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
PDCD4Q53EL6 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDCD4Q53EL6 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDCD4Q53EL6 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.14■□□□□ 0.65
PDCD4Q53EL6 MYCNOS-205ENST00000641950 531 ntBASIC19.14■□□□□ 0.65
PDCD4Q53EL6 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
PDCD4Q53EL6 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PDCD4Q53EL6 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDCD4Q53EL6 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDCD4Q53EL6 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.14■□□□□ 0.65
PDCD4Q53EL6 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDCD4Q53EL6 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PDCD4Q53EL6 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PDCD4Q53EL6 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDCD4Q53EL6 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PDCD4Q53EL6 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PDCD4Q53EL6 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PDCD4Q53EL6 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.13■□□□□ 0.65
PDCD4Q53EL6 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.13■□□□□ 0.65
PDCD4Q53EL6 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.13■□□□□ 0.65
PDCD4Q53EL6 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PDCD4Q53EL6 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDCD4Q53EL6 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PDCD4Q53EL6 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDCD4Q53EL6 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms