Protein–RNA interactions for Protein: Q06287

EMG1, Ribosomal RNA small subunit methyltransferase NEP1, yeastyeast

Known RBP Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
EMG1Q06287 YCS4YLR272C 3531 nt1.92□□□□□ -2.1
EMG1Q06287 snR62snR62 100 nt1.92□□□□□ -2.1
EMG1Q06287 USO1YDL058W 5373 nt1.91□□□□□ -2.1
EMG1Q06287 KAP122YGL016W 3246 nt1.91□□□□□ -2.1
EMG1Q06287 SET3YKR029C 2256 nt1.91□□□□□ -2.1
EMG1Q06287 RGA1YOR127W 3024 nt1.91□□□□□ -2.1
EMG1Q06287 RPM2YML091C 3609 nt1.9□□□□□ -2.11
EMG1Q06287 KCS1YDR017C 3153 nt1.9□□□□□ -2.11
EMG1Q06287 YOR093CYOR093C 4947 nt1.88□□□□□ -2.11
EMG1Q06287 APL3YBL037W 3078 nt1.88□□□□□ -2.11
EMG1Q06287 FIG2YCR089W 4830 nt1.87□□□□□ -2.11
EMG1Q06287 RAD9YDR217C 3930 nt1.87□□□□□ -2.11
EMG1Q06287 CDC25YLR310C 4770 nt1.87□□□□□ -2.11
EMG1Q06287 DNF3YMR162C 4971 nt1.86□□□□□ -2.11
EMG1Q06287 GEA2YEL022W 4380 nt1.86□□□□□ -2.11
EMG1Q06287 YOL083C-AYOL083C-A 141 nt1.85□□□□□ -2.11
EMG1Q06287 YLR419WYLR419W 4308 nt1.84□□□□□ -2.11
EMG1Q06287 TMA7YLR262C-A 195 nt1.84□□□□□ -2.11
EMG1Q06287 YMR045CYMR045C 5268 nt1.83□□□□□ -2.12
EMG1Q06287 BEM3YPL115C 3387 nt1.82□□□□□ -2.12
EMG1Q06287 YBR200W-AYBR200W-A 165 nt1.81□□□□□ -2.12
EMG1Q06287 SWI4YER111C 3282 nt1.81□□□□□ -2.12
EMG1Q06287 YBR196C-AYBR196C-A 150 nt1.8□□□□□ -2.12
EMG1Q06287 ASE1YOR058C 2658 nt1.8□□□□□ -2.12
EMG1Q06287 SEC8YPR055W 3198 nt1.79□□□□□ -2.12
EMG1Q06287 PRP16YKR086W 3216 nt1.79□□□□□ -2.12
EMG1Q06287 NUP145YGL092W 3954 nt1.78□□□□□ -2.12
EMG1Q06287 YBL071C-BYBL071C-B 99 nt1.77□□□□□ -2.13
EMG1Q06287 MON2YNL297C 4911 nt1.77□□□□□ -2.13
EMG1Q06287 SEC3YER008C 4011 nt1.76□□□□□ -2.13
EMG1Q06287 YBL100W-CYBL100W-C 120 nt1.76□□□□□ -2.13
EMG1Q06287 YDL073WYDL073W 2955 nt1.76□□□□□ -2.13
EMG1Q06287 BST1YFL025C 3090 nt1.73□□□□□ -2.13
EMG1Q06287 YLR399W-AYLR399W-A 105 nt1.72□□□□□ -2.13
EMG1Q06287 IRC20YLR247C 4671 nt1.71□□□□□ -2.14
EMG1Q06287 UBP3YER151C 2739 nt1.71□□□□□ -2.14
EMG1Q06287 YDR034C-AYDR034C-A 177 nt1.71□□□□□ -2.14
EMG1Q06287 PKH3YDR466W 2697 nt1.7□□□□□ -2.14
EMG1Q06287 RPS26AYGL189C 360 nt1.7□□□□□ -2.14
EMG1Q06287 SEC10YLR166C 2616 nt1.7□□□□□ -2.14
EMG1Q06287 AZF1YOR113W 2745 nt1.69□□□□□ -2.14
EMG1Q06287 YSP1YHR155W 3687 nt1.69□□□□□ -2.14
EMG1Q06287 MSN5YDR335W 3675 nt1.68□□□□□ -2.14
EMG1Q06287 PMD1YER132C 5262 nt1.68□□□□□ -2.14
EMG1Q06287 MEC1YBR136W 7107 nt1.67□□□□□ -2.14
EMG1Q06287 YPR160W-AYPR160W-A 81 nt1.67□□□□□ -2.14
EMG1Q06287 tN(GUU)QtN(GUU)Q 71 nt1.66□□□□□ -2.14
EMG1Q06287 YOL164W-AYOL164W-A 183 nt1.66□□□□□ -2.14
EMG1Q06287 NUP188YML103C 4968 nt1.66□□□□□ -2.14
EMG1Q06287 YGR240C-AYGR240C-A 201 nt1.65□□□□□ -2.15
EMG1Q06287 YMR247W-AYMR247W-A 144 nt1.65□□□□□ -2.15
EMG1Q06287 PEP1YBL017C 4740 nt1.65□□□□□ -2.15
EMG1Q06287 YMR272W-BYMR272W-B 108 nt1.64□□□□□ -2.15
EMG1Q06287 GLG1YKR058W 1851 nt1.64□□□□□ -2.15
EMG1Q06287 NNF2YGR089W 2811 nt1.64□□□□□ -2.15
EMG1Q06287 CLU1YMR012W 3834 nt1.63□□□□□ -2.15
EMG1Q06287 tT(UGU)HtT(UGU)H 72 nt1.63□□□□□ -2.15
EMG1Q06287 EST2YLR318W 2655 nt1.63□□□□□ -2.15
EMG1Q06287 YLR286W-AYLR286W-A 135 nt1.61□□□□□ -2.15
EMG1Q06287 TRM732YMR259C 4263 nt1.61□□□□□ -2.15
EMG1Q06287 ULP2YIL031W 3105 nt1.61□□□□□ -2.15
EMG1Q06287 NUP192YJL039C 5052 nt1.61□□□□□ -2.15
EMG1Q06287 PIK1YNL267W 3201 nt1.6□□□□□ -2.15
EMG1Q06287 CFT1YDR301W 4074 nt1.6□□□□□ -2.15
EMG1Q06287 IRA1YBR140C 9279 nt1.57□□□□□ -2.16
EMG1Q06287 SXM1YDR395W 2835 nt1.56□□□□□ -2.16
EMG1Q06287 ANS1YHR126C 480 nt1.55□□□□□ -2.16
EMG1Q06287 tD(GUC)QtD(GUC)Q 75 nt1.54□□□□□ -2.16
EMG1Q06287 snR47snR47 99 nt1.54□□□□□ -2.16
EMG1Q06287 SAC3YDR159W 3906 nt1.54□□□□□ -2.16
EMG1Q06287 CDC39YCR093W 6327 nt1.52□□□□□ -2.17
EMG1Q06287 SSK2YNR031C 4740 nt1.52□□□□□ -2.17
EMG1Q06287 BRR2YER172C 6492 nt1.52□□□□□ -2.17
EMG1Q06287 VPS15YBR097W 4365 nt1.52□□□□□ -2.17
EMG1Q06287 MSH3YCR092C 3057 nt1.49□□□□□ -2.17
EMG1Q06287 tQ(UUG)E2tQ(UUG)E2 72 nt1.48□□□□□ -2.17
EMG1Q06287 YLR299C-AYLR299C-A 93 nt1.48□□□□□ -2.17
EMG1Q06287 snR69snR69 101 nt1.47□□□□□ -2.17
EMG1Q06287 EST1YLR233C 2100 nt1.46□□□□□ -2.18
EMG1Q06287 HUG1YML058W-A 207 nt1.46□□□□□ -2.18
EMG1Q06287 CSE1YGL238W 2883 nt1.45□□□□□ -2.18
EMG1Q06287 PET127YOR017W 2403 nt1.44□□□□□ -2.18
EMG1Q06287 YDL159C-BYDL159C-B 177 nt1.43□□□□□ -2.18
EMG1Q06287 ORC3YLL004W 1851 nt1.43□□□□□ -2.18
EMG1Q06287 CAT8YMR280C 4302 nt1.42□□□□□ -2.18
EMG1Q06287 YLL006W-AYLL006W-A 177 nt1.42□□□□□ -2.18
EMG1Q06287 snR53snR53 91 nt1.42□□□□□ -2.18
EMG1Q06287 RDS3YPR094W 324 nt1.41□□□□□ -2.18
EMG1Q06287 CCH1YGR217W 6120 nt1.41□□□□□ -2.18
EMG1Q06287 YGR130CYGR130C 2451 nt1.39□□□□□ -2.19
EMG1Q06287 FYV8YGR196C 2454 nt1.39□□□□□ -2.19
EMG1Q06287 snR64snR64 101 nt1.38□□□□□ -2.19
EMG1Q06287 SPT7YBR081C 3999 nt1.37□□□□□ -2.19
EMG1Q06287 YJL077W-AYJL077W-A 87 nt1.37□□□□□ -2.19
EMG1Q06287 LAA1YJL207C 6045 nt1.36□□□□□ -2.19
EMG1Q06287 SIP4YJL089W 2490 nt1.35□□□□□ -2.19
EMG1Q06287 NIP1YMR309C 2439 nt1.35□□□□□ -2.19
EMG1Q06287 SPC110YDR356W 2835 nt1.33□□□□□ -2.2
EMG1Q06287 BUL2YML111W 2763 nt1.32□□□□□ -2.2
EMG1Q06287 YHR180C-BYHR180C-B 105 nt1.3□□□□□ -2.2
Retrieved 100 of 7,029 protein–RNA pairs in 12.1 ms