Protein–RNA interactions for Protein: P60842

EIF4A1, Eukaryotic initiation factor 4A-I, humanhuman

Known RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1P60842 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC25.67■■□□□ 1.7
EIF4A1P60842 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
EIF4A1P60842 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
EIF4A1P60842 SMG8-203ENST00000578922 2178 ntBASIC25.67■■□□□ 1.7
EIF4A1P60842 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC25.67■■□□□ 1.7
EIF4A1P60842 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC25.67■■□□□ 1.7
EIF4A1P60842 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
EIF4A1P60842 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
EIF4A1P60842 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC25.67■■□□□ 1.7
EIF4A1P60842 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
EIF4A1P60842 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC25.66■■□□□ 1.7
EIF4A1P60842 HTR7P1-201ENST00000538670 1336 ntBASIC25.66■■□□□ 1.7
EIF4A1P60842 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC25.66■■□□□ 1.7
EIF4A1P60842 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
EIF4A1P60842 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
EIF4A1P60842 CALM3-202ENST00000391918 702 ntTSL 2 BASIC25.66■■□□□ 1.7
EIF4A1P60842 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC25.66■■□□□ 1.7
EIF4A1P60842 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC25.66■■□□□ 1.7
EIF4A1P60842 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC25.66■■□□□ 1.7
EIF4A1P60842 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC25.66■■□□□ 1.7
EIF4A1P60842 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC25.66■■□□□ 1.7
EIF4A1P60842 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
EIF4A1P60842 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
EIF4A1P60842 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC25.65■■□□□ 1.7
EIF4A1P60842 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
EIF4A1P60842 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC25.65■■□□□ 1.7
EIF4A1P60842 SAPCD2P4-201ENST00000424595 1171 ntBASIC25.65■■□□□ 1.7
EIF4A1P60842 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC25.65■■□□□ 1.7
EIF4A1P60842 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
EIF4A1P60842 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC25.65■■□□□ 1.7
EIF4A1P60842 AF186192.3-201ENST00000583427 947 ntBASIC25.65■■□□□ 1.7
EIF4A1P60842 AP001412.1-201ENST00000608405 714 ntBASIC25.65■■□□□ 1.7
EIF4A1P60842 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
EIF4A1P60842 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC25.65■■□□□ 1.7
EIF4A1P60842 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC25.65■■□□□ 1.7
EIF4A1P60842 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
EIF4A1P60842 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC25.65■■□□□ 1.7
EIF4A1P60842 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
EIF4A1P60842 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
EIF4A1P60842 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
EIF4A1P60842 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
EIF4A1P60842 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
EIF4A1P60842 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC25.64■■□□□ 1.7
EIF4A1P60842 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
EIF4A1P60842 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
EIF4A1P60842 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC25.64■■□□□ 1.7
EIF4A1P60842 TSPY15P-201ENST00000457163 923 ntBASIC25.64■■□□□ 1.7
EIF4A1P60842 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC25.64■■□□□ 1.7
EIF4A1P60842 PENK-204ENST00000518770 863 ntTSL 2 BASIC25.64■■□□□ 1.7
EIF4A1P60842 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC25.64■■□□□ 1.7
EIF4A1P60842 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC25.64■■□□□ 1.7
EIF4A1P60842 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC25.64■■□□□ 1.7
EIF4A1P60842 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
EIF4A1P60842 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
EIF4A1P60842 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
EIF4A1P60842 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
EIF4A1P60842 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC25.63■■□□□ 1.69
EIF4A1P60842 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC25.63■■□□□ 1.69
EIF4A1P60842 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
EIF4A1P60842 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
EIF4A1P60842 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
EIF4A1P60842 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
EIF4A1P60842 AC116351.2-201ENST00000606540 1585 ntBASIC25.63■■□□□ 1.69
EIF4A1P60842 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC25.63■■□□□ 1.69
EIF4A1P60842 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
EIF4A1P60842 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC25.63■■□□□ 1.69
EIF4A1P60842 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC25.62■■□□□ 1.69
EIF4A1P60842 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
EIF4A1P60842 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
EIF4A1P60842 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC25.62■■□□□ 1.69
EIF4A1P60842 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
EIF4A1P60842 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC25.62■■□□□ 1.69
EIF4A1P60842 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
EIF4A1P60842 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
EIF4A1P60842 GRAP-204ENST00000573099 846 ntTSL 3 BASIC25.62■■□□□ 1.69
EIF4A1P60842 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
EIF4A1P60842 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
EIF4A1P60842 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
EIF4A1P60842 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
EIF4A1P60842 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
EIF4A1P60842 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
EIF4A1P60842 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC25.61■■□□□ 1.69
EIF4A1P60842 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
EIF4A1P60842 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
EIF4A1P60842 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
EIF4A1P60842 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
EIF4A1P60842 GXYLT1P3-201ENST00000453058 1193 ntBASIC25.61■■□□□ 1.69
EIF4A1P60842 FDX2-207ENST00000494368 584 ntTSL 4 BASIC25.61■■□□□ 1.69
EIF4A1P60842 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC25.61■■□□□ 1.69
EIF4A1P60842 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC25.61■■□□□ 1.69
EIF4A1P60842 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
EIF4A1P60842 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
EIF4A1P60842 KRT16P6-202ENST00000425692 1426 ntBASIC25.61■■□□□ 1.69
EIF4A1P60842 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC25.61■■□□□ 1.69
EIF4A1P60842 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
EIF4A1P60842 TFP1-202ENST00000475455 1573 ntBASIC25.61■■□□□ 1.69
EIF4A1P60842 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
EIF4A1P60842 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
EIF4A1P60842 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC25.6■■□□□ 1.69
EIF4A1P60842 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms