Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMIM11AP58511 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMIM11AP58511 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SMIM11AP58511 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.4■□□□□ 0.54
SMIM11AP58511 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.4■□□□□ 0.54
SMIM11AP58511 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SMIM11AP58511 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
SMIM11AP58511 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SMIM11AP58511 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SMIM11AP58511 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.39■□□□□ 0.54
SMIM11AP58511 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
SMIM11AP58511 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMIM11AP58511 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SMIM11AP58511 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SMIM11AP58511 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SMIM11AP58511 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SMIM11AP58511 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
SMIM11AP58511 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.39■□□□□ 0.53
SMIM11AP58511 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
SMIM11AP58511 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMIM11AP58511 AC087289.5-201ENST00000586076 3175 ntBASIC18.39■□□□□ 0.53
SMIM11AP58511 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SMIM11AP58511 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMIM11AP58511 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMIM11AP58511 AC004854.2-201ENST00000608450 1441 ntBASIC18.39■□□□□ 0.53
SMIM11AP58511 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SMIM11AP58511 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.39■□□□□ 0.53
SMIM11AP58511 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMIM11AP58511 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.39■□□□□ 0.53
SMIM11AP58511 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.39■□□□□ 0.53
SMIM11AP58511 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMIM11AP58511 AC005332.7-201ENST00000614046 2005 ntBASIC18.39■□□□□ 0.53
SMIM11AP58511 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMIM11AP58511 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
SMIM11AP58511 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMIM11AP58511 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMIM11AP58511 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMIM11AP58511 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.38■□□□□ 0.53
SMIM11AP58511 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.38■□□□□ 0.53
SMIM11AP58511 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.38■□□□□ 0.53
SMIM11AP58511 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SMIM11AP58511 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SMIM11AP58511 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SMIM11AP58511 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMIM11AP58511 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.38■□□□□ 0.53
SMIM11AP58511 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.38■□□□□ 0.53
SMIM11AP58511 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.38■□□□□ 0.53
SMIM11AP58511 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMIM11AP58511 KRT18P14-201ENST00000534205 1250 ntBASIC18.38■□□□□ 0.53
SMIM11AP58511 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.38■□□□□ 0.53
SMIM11AP58511 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMIM11AP58511 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMIM11AP58511 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMIM11AP58511 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMIM11AP58511 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SMIM11AP58511 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SMIM11AP58511 AC009237.14-201ENST00000609975 1594 ntBASIC18.38■□□□□ 0.53
SMIM11AP58511 TREX1-205ENST00000625293 1783 ntBASIC18.37■□□□□ 0.53
SMIM11AP58511 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.37■□□□□ 0.53
SMIM11AP58511 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMIM11AP58511 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.37■□□□□ 0.53
SMIM11AP58511 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMIM11AP58511 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.37■□□□□ 0.53
SMIM11AP58511 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMIM11AP58511 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMIM11AP58511 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMIM11AP58511 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SMIM11AP58511 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMIM11AP58511 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.37■□□□□ 0.53
SMIM11AP58511 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SMIM11AP58511 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.37■□□□□ 0.53
SMIM11AP58511 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.37■□□□□ 0.53
SMIM11AP58511 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMIM11AP58511 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMIM11AP58511 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMIM11AP58511 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SMIM11AP58511 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SMIM11AP58511 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMIM11AP58511 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMIM11AP58511 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
SMIM11AP58511 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.37■□□□□ 0.53
SMIM11AP58511 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
SMIM11AP58511 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMIM11AP58511 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.37■□□□□ 0.53
SMIM11AP58511 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SMIM11AP58511 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SMIM11AP58511 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SMIM11AP58511 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SMIM11AP58511 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
SMIM11AP58511 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SMIM11AP58511 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SMIM11AP58511 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SMIM11AP58511 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.36■□□□□ 0.53
SMIM11AP58511 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.36■□□□□ 0.53
SMIM11AP58511 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SMIM11AP58511 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SMIM11AP58511 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SMIM11AP58511 AL591742.1-201ENST00000604433 565 ntBASIC18.36■□□□□ 0.53
SMIM11AP58511 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.36■□□□□ 0.53
SMIM11AP58511 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms