Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.52■□□□□ 0.72
CDH13P55290 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.52■□□□□ 0.72
CDH13P55290 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CDH13P55290 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.52■□□□□ 0.72
CDH13P55290 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.52■□□□□ 0.72
CDH13P55290 DUX4L16-201ENST00000555130 1264 ntBASIC19.52■□□□□ 0.72
CDH13P55290 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.52■□□□□ 0.72
CDH13P55290 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
CDH13P55290 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.52■□□□□ 0.72
CDH13P55290 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
CDH13P55290 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDH13P55290 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CDH13P55290 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CDH13P55290 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CDH13P55290 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.52■□□□□ 0.71
CDH13P55290 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDH13P55290 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDH13P55290 AC068338.2-201ENST00000563278 1430 ntBASIC19.51■□□□□ 0.71
CDH13P55290 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.51■□□□□ 0.71
CDH13P55290 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.51■□□□□ 0.71
CDH13P55290 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDH13P55290 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDH13P55290 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CDH13P55290 RARRES2P4-201ENST00000514074 484 ntBASIC19.51■□□□□ 0.71
CDH13P55290 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDH13P55290 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.51■□□□□ 0.71
CDH13P55290 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.51■□□□□ 0.71
CDH13P55290 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDH13P55290 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.51■□□□□ 0.71
CDH13P55290 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDH13P55290 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDH13P55290 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.51■□□□□ 0.71
CDH13P55290 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDH13P55290 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDH13P55290 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDH13P55290 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDH13P55290 PTBP1P-201ENST00000554374 1601 ntBASIC19.51■□□□□ 0.71
CDH13P55290 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDH13P55290 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDH13P55290 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.5■□□□□ 0.71
CDH13P55290 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDH13P55290 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDH13P55290 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDH13P55290 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDH13P55290 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDH13P55290 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDH13P55290 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDH13P55290 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDH13P55290 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CDH13P55290 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
CDH13P55290 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.5■□□□□ 0.71
CDH13P55290 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.5■□□□□ 0.71
CDH13P55290 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.5■□□□□ 0.71
CDH13P55290 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.5■□□□□ 0.71
CDH13P55290 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.5■□□□□ 0.71
CDH13P55290 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDH13P55290 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CDH13P55290 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.5■□□□□ 0.71
CDH13P55290 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDH13P55290 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDH13P55290 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDH13P55290 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.49■□□□□ 0.71
CDH13P55290 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDH13P55290 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.49■□□□□ 0.71
CDH13P55290 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDH13P55290 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDH13P55290 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDH13P55290 MCRIP2P1-201ENST00000394346 511 ntBASIC19.49■□□□□ 0.71
CDH13P55290 AC026271.2-201ENST00000428091 497 ntBASIC19.49■□□□□ 0.71
CDH13P55290 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDH13P55290 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDH13P55290 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.49■□□□□ 0.71
CDH13P55290 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDH13P55290 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDH13P55290 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDH13P55290 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CDH13P55290 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH13P55290 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.48■□□□□ 0.71
CDH13P55290 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH13P55290 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.48■□□□□ 0.71
CDH13P55290 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH13P55290 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CDH13P55290 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH13P55290 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CDH13P55290 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
CDH13P55290 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDH13P55290 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CDH13P55290 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH13P55290 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
CDH13P55290 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.48■□□□□ 0.71
CDH13P55290 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CDH13P55290 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CDH13P55290 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDH13P55290 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CDH13P55290 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH13P55290 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
CDH13P55290 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH13P55290 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH13P55290 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.48■□□□□ 0.71
CDH13P55290 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms