Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.59■□□□□ 0.89
PMS2P54278 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
PMS2P54278 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PMS2P54278 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PMS2P54278 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PMS2P54278 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
PMS2P54278 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.58■□□□□ 0.89
PMS2P54278 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PMS2P54278 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.58■□□□□ 0.89
PMS2P54278 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PMS2P54278 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.58■□□□□ 0.89
PMS2P54278 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.58■□□□□ 0.89
PMS2P54278 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PMS2P54278 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.58■□□□□ 0.89
PMS2P54278 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PMS2P54278 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
PMS2P54278 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
PMS2P54278 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PMS2P54278 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PMS2P54278 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PMS2P54278 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PMS2P54278 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PMS2P54278 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.58■□□□□ 0.89
PMS2P54278 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PMS2P54278 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.58■□□□□ 0.89
PMS2P54278 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PMS2P54278 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PMS2P54278 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
PMS2P54278 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.58■□□□□ 0.88
PMS2P54278 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.58■□□□□ 0.88
PMS2P54278 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.58■□□□□ 0.88
PMS2P54278 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.58■□□□□ 0.88
PMS2P54278 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
PMS2P54278 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
PMS2P54278 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PMS2P54278 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PMS2P54278 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.57■□□□□ 0.88
PMS2P54278 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.57■□□□□ 0.88
PMS2P54278 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PMS2P54278 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PMS2P54278 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PMS2P54278 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PMS2P54278 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PMS2P54278 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PMS2P54278 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
PMS2P54278 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PMS2P54278 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.57■□□□□ 0.88
PMS2P54278 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
PMS2P54278 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
PMS2P54278 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PMS2P54278 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
PMS2P54278 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.57■□□□□ 0.88
PMS2P54278 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PMS2P54278 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.57■□□□□ 0.88
PMS2P54278 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PMS2P54278 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
PMS2P54278 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PMS2P54278 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.56■□□□□ 0.88
PMS2P54278 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PMS2P54278 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PMS2P54278 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.56■□□□□ 0.88
PMS2P54278 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.56■□□□□ 0.88
PMS2P54278 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PMS2P54278 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
PMS2P54278 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PMS2P54278 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.56■□□□□ 0.88
PMS2P54278 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.56■□□□□ 0.88
PMS2P54278 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PMS2P54278 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PMS2P54278 TPRG1LP1-201ENST00000598702 760 ntBASIC20.56■□□□□ 0.88
PMS2P54278 AC120498.10-201ENST00000621827 505 ntBASIC20.56■□□□□ 0.88
PMS2P54278 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
PMS2P54278 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PMS2P54278 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
PMS2P54278 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.56■□□□□ 0.88
PMS2P54278 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PMS2P54278 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PMS2P54278 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.56■□□□□ 0.88
PMS2P54278 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.56■□□□□ 0.88
PMS2P54278 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
PMS2P54278 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PMS2P54278 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PMS2P54278 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PMS2P54278 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.55■□□□□ 0.88
PMS2P54278 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
PMS2P54278 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PMS2P54278 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PMS2P54278 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PMS2P54278 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.55■□□□□ 0.88
PMS2P54278 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.55■□□□□ 0.88
PMS2P54278 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PMS2P54278 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
PMS2P54278 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.55■□□□□ 0.88
PMS2P54278 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.55■□□□□ 0.88
PMS2P54278 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.55■□□□□ 0.88
PMS2P54278 AC138907.5-202ENST00000569484 235 ntBASIC20.55■□□□□ 0.88
PMS2P54278 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.55■□□□□ 0.88
PMS2P54278 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
PMS2P54278 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
PMS2P54278 KRT87P-202ENST00000534226 1464 ntBASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms