Protein–RNA interactions for Protein: P53836

CAF120, CCR4-NOT transcriptional complex subunit CAF120, yeastyeast

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CAF120P53836 STH1YIL126W 4080 nt2.24□□□□□ -2.05
CAF120P53836 snR190snR190 190 nt2.22□□□□□ -2.05
CAF120P53836 NIP1YMR309C 2439 nt2.22□□□□□ -2.05
CAF120P53836 PET127YOR017W 2403 nt2.22□□□□□ -2.05
CAF120P53836 PET309YLR067C 2898 nt2.22□□□□□ -2.05
CAF120P53836 YHR180W-AYHR180W-A 183 nt2.21□□□□□ -2.06
CAF120P53836 YHR180C-BYHR180C-B 105 nt2.2□□□□□ -2.06
CAF120P53836 CHS1YNL192W 3396 nt2.2□□□□□ -2.06
CAF120P53836 BNI1YNL271C 5862 nt2.2□□□□□ -2.06
CAF120P53836 DNF1YER166W 4716 nt2.19□□□□□ -2.06
CAF120P53836 NUT1YGL151W 3399 nt2.19□□□□□ -2.06
CAF120P53836 YDL159C-BYDL159C-B 177 nt2.19□□□□□ -2.06
CAF120P53836 BEM3YPL115C 3387 nt2.19□□□□□ -2.06
CAF120P53836 IRE1YHR079C 3348 nt2.18□□□□□ -2.06
CAF120P53836 HER1YOR227W 3741 nt2.18□□□□□ -2.06
CAF120P53836 YML054C-AYML054C-A 159 nt2.18□□□□□ -2.06
CAF120P53836 GYP5YPL249C 2685 nt2.18□□□□□ -2.06
CAF120P53836 INO80YGL150C 4470 nt2.17□□□□□ -2.06
CAF120P53836 ATG9YDL149W 2994 nt2.17□□□□□ -2.06
CAF120P53836 PKH3YDR466W 2697 nt2.17□□□□□ -2.06
CAF120P53836 TFC3YAL001C 3483 nt2.17□□□□□ -2.06
CAF120P53836 TDA9YML081W 3756 nt2.17□□□□□ -2.06
CAF120P53836 YAR009CYAR009C 3591 nt2.16□□□□□ -2.06
CAF120P53836 PET111YMR257C 2403 nt2.16□□□□□ -2.06
CAF120P53836 CHC1YGL206C 4962 nt2.14□□□□□ -2.07
CAF120P53836 SAC3YDR159W 3906 nt2.13□□□□□ -2.07
CAF120P53836 EST1YLR233C 2100 nt2.13□□□□□ -2.07
CAF120P53836 UTP22YGR090W 3714 nt2.13□□□□□ -2.07
CAF120P53836 YOR343W-BYOR343W-B 5313 nt2.12□□□□□ -2.07
CAF120P53836 YOL098CYOL098C 3114 nt2.12□□□□□ -2.07
CAF120P53836 USO1YDL058W 5373 nt2.12□□□□□ -2.07
CAF120P53836 YJL052C-AYJL052C-A 120 nt2.11□□□□□ -2.07
CAF120P53836 YPR160W-AYPR160W-A 81 nt2.1□□□□□ -2.07
CAF120P53836 HIR3YJR140C 4947 nt2.1□□□□□ -2.07
CAF120P53836 HSL1YKL101W 4557 nt2.07□□□□□ -2.08
CAF120P53836 snR69snR69 101 nt2.07□□□□□ -2.08
CAF120P53836 EMC5YIL027C 426 nt2.05□□□□□ -2.08
CAF120P53836 DGR1YNL130C-A 147 nt2.05□□□□□ -2.08
CAF120P53836 KOG1YHR186C 4674 nt2.05□□□□□ -2.08
CAF120P53836 MYO4YAL029C 4416 nt2.04□□□□□ -2.08
CAF120P53836 RDS3YPR094W 324 nt2.04□□□□□ -2.08
CAF120P53836 SPP41YDR464W 4308 nt2.04□□□□□ -2.08
CAF120P53836 NST1YNL091W 3723 nt2.04□□□□□ -2.08
CAF120P53836 UTP21YLR409C 2820 nt2.04□□□□□ -2.08
CAF120P53836 TOR2YKL203C 7425 nt2.03□□□□□ -2.08
CAF120P53836 SEC31YDL195W 3822 nt2.03□□□□□ -2.08
CAF120P53836 MSH6YDR097C 3729 nt2.03□□□□□ -2.08
CAF120P53836 TMA7YLR262C-A 195 nt2.03□□□□□ -2.08
CAF120P53836 YPL060C-AYPL060C-A 3315 nt2.02□□□□□ -2.09
CAF120P53836 RAD50YNL250W 3939 nt2.02□□□□□ -2.09
CAF120P53836 IRC20YLR247C 4671 nt2.02□□□□□ -2.09
CAF120P53836 ULP2YIL031W 3105 nt2□□□□□ -2.09
CAF120P53836 YHR214C-BYHR214C-B 5382 nt2□□□□□ -2.09
CAF120P53836 EST2YLR318W 2655 nt2□□□□□ -2.09
CAF120P53836 YLR422WYLR422W 5799 nt2□□□□□ -2.09
CAF120P53836 HUG1YML058W-A 207 nt1.99□□□□□ -2.09
CAF120P53836 CSE1YGL238W 2883 nt1.99□□□□□ -2.09
CAF120P53836 KCS1YDR017C 3153 nt1.98□□□□□ -2.09
CAF120P53836 SXM1YDR395W 2835 nt1.97□□□□□ -2.09
CAF120P53836 FKS1YLR342W 5631 nt1.97□□□□□ -2.09
CAF120P53836 FAB1YFR019W 6837 nt1.97□□□□□ -2.09
CAF120P53836 snR14snR14 160 nt1.95□□□□□ -2.1
CAF120P53836 PRP16YKR086W 3216 nt1.95□□□□□ -2.1
CAF120P53836 tN(GUU)QtN(GUU)Q 71 nt1.94□□□□□ -2.1
CAF120P53836 YSP1YHR155W 3687 nt1.94□□□□□ -2.1
CAF120P53836 SEC8YPR055W 3198 nt1.94□□□□□ -2.1
CAF120P53836 SIP4YJL089W 2490 nt1.93□□□□□ -2.1
CAF120P53836 YCS4YLR272C 3531 nt1.93□□□□□ -2.1
CAF120P53836 STO1YMR125W 2586 nt1.93□□□□□ -2.1
CAF120P53836 YOR376W-AYOR376W-A 156 nt1.93□□□□□ -2.1
CAF120P53836 KAP122YGL016W 3246 nt1.93□□□□□ -2.1
CAF120P53836 PEP1YBL017C 4740 nt1.92□□□□□ -2.1
CAF120P53836 YLR419WYLR419W 4308 nt1.92□□□□□ -2.1
CAF120P53836 NUP192YJL039C 5052 nt1.92□□□□□ -2.1
CAF120P53836 UBP2YOR124C 3819 nt1.92□□□□□ -2.1
CAF120P53836 CDC25YLR310C 4770 nt1.91□□□□□ -2.1
CAF120P53836 UBR2YLR024C 5619 nt1.9□□□□□ -2.1
CAF120P53836 MSH3YCR092C 3057 nt1.9□□□□□ -2.11
CAF120P53836 SEC3YER008C 4011 nt1.89□□□□□ -2.11
CAF120P53836 NEO1YIL048W 3456 nt1.89□□□□□ -2.11
CAF120P53836 GEA2YEL022W 4380 nt1.88□□□□□ -2.11
CAF120P53836 SKI3YPR189W 4299 nt1.88□□□□□ -2.11
CAF120P53836 YLR399W-AYLR399W-A 105 nt1.88□□□□□ -2.11
CAF120P53836 BUL2YML111W 2763 nt1.87□□□□□ -2.11
CAF120P53836 MSN5YDR335W 3675 nt1.87□□□□□ -2.11
CAF120P53836 YOR093CYOR093C 4947 nt1.86□□□□□ -2.11
CAF120P53836 PAU12YGR294W 363 nt1.85□□□□□ -2.11
CAF120P53836 YJL077W-AYJL077W-A 87 nt1.85□□□□□ -2.11
CAF120P53836 SMC4YLR086W 4257 nt1.84□□□□□ -2.11
CAF120P53836 YMR045CYMR045C 5268 nt1.83□□□□□ -2.12
CAF120P53836 PMD1YER132C 5262 nt1.82□□□□□ -2.12
CAF120P53836 YMR272W-BYMR272W-B 108 nt1.81□□□□□ -2.12
CAF120P53836 CAT8YMR280C 4302 nt1.8□□□□□ -2.12
CAF120P53836 YMR247W-AYMR247W-A 144 nt1.8□□□□□ -2.12
CAF120P53836 APL3YBL037W 3078 nt1.77□□□□□ -2.13
CAF120P53836 tT(UGU)HtT(UGU)H 72 nt1.77□□□□□ -2.13
CAF120P53836 SSK2YNR031C 4740 nt1.77□□□□□ -2.13
CAF120P53836 YDL114W-AYDL114W-A 114 nt1.76□□□□□ -2.13
CAF120P53836 tQ(UUG)QtQ(UUG)Q 76 nt1.76□□□□□ -2.13
CAF120P53836 SPC110YDR356W 2835 nt1.75□□□□□ -2.13
Retrieved 100 of 7,029 protein–RNA pairs in 7.6 ms