Protein–RNA interactions for Protein: P53179

RIM8, pH-response regulator protein palF/RIM8, yeastyeast

Predictions only

Length 542 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RIM8P53179 snR53snR53 91 nt1.76□□□□□ -2.13
RIM8P53179 PAN2YGL094C 3348 nt1.76□□□□□ -2.13
RIM8P53179 SMC1YFL008W 3678 nt1.75□□□□□ -2.13
RIM8P53179 snR47snR47 99 nt1.75□□□□□ -2.13
RIM8P53179 snR190snR190 190 nt1.74□□□□□ -2.13
RIM8P53179 MMS4YBR098W 2076 nt1.74□□□□□ -2.13
RIM8P53179 ATG9YDL149W 2994 nt1.74□□□□□ -2.13
RIM8P53179 RPL26BYGR034W 384 nt1.73□□□□□ -2.13
RIM8P53179 SMC4YLR086W 4257 nt1.73□□□□□ -2.13
RIM8P53179 MYO4YAL029C 4416 nt1.73□□□□□ -2.13
RIM8P53179 NOP9YJL010C 2001 nt1.73□□□□□ -2.13
RIM8P53179 PIK1YNL267W 3201 nt1.72□□□□□ -2.13
RIM8P53179 AZF1YOR113W 2745 nt1.71□□□□□ -2.14
RIM8P53179 ASE1YOR058C 2658 nt1.71□□□□□ -2.14
RIM8P53179 MON2YNL297C 4911 nt1.71□□□□□ -2.14
RIM8P53179 WAR1YML076C 2835 nt1.7□□□□□ -2.14
RIM8P53179 EMC5YIL027C 426 nt1.7□□□□□ -2.14
RIM8P53179 YDL073WYDL073W 2955 nt1.7□□□□□ -2.14
RIM8P53179 GEA2YEL022W 4380 nt1.7□□□□□ -2.14
RIM8P53179 YLR286W-AYLR286W-A 135 nt1.69□□□□□ -2.14
RIM8P53179 YHR214C-BYHR214C-B 5382 nt1.68□□□□□ -2.14
RIM8P53179 snR64snR64 101 nt1.68□□□□□ -2.14
RIM8P53179 KIP1YBL063W 3336 nt1.68□□□□□ -2.14
RIM8P53179 TDA9YML081W 3756 nt1.68□□□□□ -2.14
RIM8P53179 BRR2YER172C 6492 nt1.67□□□□□ -2.14
RIM8P53179 KAP122YGL016W 3246 nt1.67□□□□□ -2.14
RIM8P53179 SEC10YLR166C 2616 nt1.67□□□□□ -2.14
RIM8P53179 STO1YMR125W 2586 nt1.66□□□□□ -2.14
RIM8P53179 PMD1YER132C 5262 nt1.66□□□□□ -2.14
RIM8P53179 RAD9YDR217C 3930 nt1.65□□□□□ -2.14
RIM8P53179 NNF2YGR089W 2811 nt1.65□□□□□ -2.14
RIM8P53179 MYO2YOR326W 4725 nt1.65□□□□□ -2.15
RIM8P53179 MYO1YHR023W 5787 nt1.64□□□□□ -2.15
RIM8P53179 TMA7YLR262C-A 195 nt1.64□□□□□ -2.15
RIM8P53179 YBR200W-AYBR200W-A 165 nt1.64□□□□□ -2.15
RIM8P53179 UBP3YER151C 2739 nt1.63□□□□□ -2.15
RIM8P53179 IRC20YLR247C 4671 nt1.63□□□□□ -2.15
RIM8P53179 YOR093CYOR093C 4947 nt1.6□□□□□ -2.15
RIM8P53179 TRM732YMR259C 4263 nt1.6□□□□□ -2.15
RIM8P53179 RPM2YML091C 3609 nt1.6□□□□□ -2.15
RIM8P53179 snR50snR50 90 nt1.59□□□□□ -2.15
RIM8P53179 SAC3YDR159W 3906 nt1.59□□□□□ -2.16
RIM8P53179 SKI3YPR189W 4299 nt1.58□□□□□ -2.16
RIM8P53179 PKH3YDR466W 2697 nt1.58□□□□□ -2.16
RIM8P53179 CHS1YNL192W 3396 nt1.58□□□□□ -2.16
RIM8P53179 VPS15YBR097W 4365 nt1.58□□□□□ -2.16
RIM8P53179 KCS1YDR017C 3153 nt1.57□□□□□ -2.16
RIM8P53179 tN(GUU)QtN(GUU)Q 71 nt1.56□□□□□ -2.16
RIM8P53179 tQ(UUG)E2tQ(UUG)E2 72 nt1.56□□□□□ -2.16
RIM8P53179 YMR247W-AYMR247W-A 144 nt1.56□□□□□ -2.16
RIM8P53179 FIG2YCR089W 4830 nt1.56□□□□□ -2.16
RIM8P53179 IRA1YBR140C 9279 nt1.55□□□□□ -2.16
RIM8P53179 CAT8YMR280C 4302 nt1.54□□□□□ -2.16
RIM8P53179 SSK2YNR031C 4740 nt1.54□□□□□ -2.16
RIM8P53179 tD(GUC)QtD(GUC)Q 75 nt1.54□□□□□ -2.16
RIM8P53179 tT(UGU)HtT(UGU)H 72 nt1.54□□□□□ -2.16
RIM8P53179 DNF3YMR162C 4971 nt1.53□□□□□ -2.16
RIM8P53179 MEC1YBR136W 7107 nt1.53□□□□□ -2.16
RIM8P53179 ANS1YHR126C 480 nt1.53□□□□□ -2.16
RIM8P53179 YKL225WYKL225W 348 nt1.52□□□□□ -2.17
RIM8P53179 BEM3YPL115C 3387 nt1.51□□□□□ -2.17
RIM8P53179 PRP16YKR086W 3216 nt1.51□□□□□ -2.17
RIM8P53179 YLR422WYLR422W 5799 nt1.51□□□□□ -2.17
RIM8P53179 YPR160W-AYPR160W-A 81 nt1.51□□□□□ -2.17
RIM8P53179 EST1YLR233C 2100 nt1.51□□□□□ -2.17
RIM8P53179 APL3YBL037W 3078 nt1.51□□□□□ -2.17
RIM8P53179 SEC3YER008C 4011 nt1.5□□□□□ -2.17
RIM8P53179 YLR299C-AYLR299C-A 93 nt1.5□□□□□ -2.17
RIM8P53179 YBR109W-AYBR109W-A 225 nt1.5□□□□□ -2.17
RIM8P53179 NUP188YML103C 4968 nt1.49□□□□□ -2.17
RIM8P53179 CCH1YGR217W 6120 nt1.48□□□□□ -2.17
RIM8P53179 PET127YOR017W 2403 nt1.48□□□□□ -2.17
RIM8P53179 SEC8YPR055W 3198 nt1.47□□□□□ -2.17
RIM8P53179 YCS4YLR272C 3531 nt1.46□□□□□ -2.18
RIM8P53179 SWI4YER111C 3282 nt1.46□□□□□ -2.18
RIM8P53179 YDL159C-BYDL159C-B 177 nt1.44□□□□□ -2.18
RIM8P53179 snR69snR69 101 nt1.43□□□□□ -2.18
RIM8P53179 ROM2YLR371W 4071 nt1.42□□□□□ -2.18
RIM8P53179 YDL159W-AYDL159W-A 132 nt1.42□□□□□ -2.18
RIM8P53179 CDC39YCR093W 6327 nt1.42□□□□□ -2.18
RIM8P53179 MSH3YCR092C 3057 nt1.41□□□□□ -2.18
RIM8P53179 BST1YFL025C 3090 nt1.41□□□□□ -2.18
RIM8P53179 FYV8YGR196C 2454 nt1.41□□□□□ -2.18
RIM8P53179 CSE1YGL238W 2883 nt1.41□□□□□ -2.18
RIM8P53179 YLR399W-AYLR399W-A 105 nt1.41□□□□□ -2.18
RIM8P53179 YML054C-AYML054C-A 159 nt1.41□□□□□ -2.18
RIM8P53179 YLR149C-AYLR149C-A 87 nt1.4□□□□□ -2.19
RIM8P53179 ULP2YIL031W 3105 nt1.4□□□□□ -2.19
RIM8P53179 CDC25YLR310C 4770 nt1.39□□□□□ -2.19
RIM8P53179 YSP1YHR155W 3687 nt1.39□□□□□ -2.19
RIM8P53179 YHR180C-BYHR180C-B 105 nt1.38□□□□□ -2.19
RIM8P53179 snR38snR38 95 nt1.38□□□□□ -2.19
RIM8P53179 NUP192YJL039C 5052 nt1.38□□□□□ -2.19
RIM8P53179 NUP145YGL092W 3954 nt1.37□□□□□ -2.19
RIM8P53179 SXM1YDR395W 2835 nt1.36□□□□□ -2.19
RIM8P53179 RPL41AYDL184C 78 nt1.36□□□□□ -2.19
RIM8P53179 YER078W-AYER078W-A 165 nt1.36□□□□□ -2.19
RIM8P53179 AI1Q0050 2505 nt1.36□□□□□ -2.19
RIM8P53179 YPL060C-AYPL060C-A 3315 nt1.36□□□□□ -2.19
RIM8P53179 BUD3YCL014W 4911 nt1.35□□□□□ -2.19
Retrieved 100 of 7,029 protein–RNA pairs in 54.4 ms