Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.25■□□□□ 0.51
HMGA2P52926 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HMGA2P52926 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMGA2P52926 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMGA2P52926 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.25■□□□□ 0.51
HMGA2P52926 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMGA2P52926 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMGA2P52926 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMGA2P52926 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HMGA2P52926 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HMGA2P52926 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.25■□□□□ 0.51
HMGA2P52926 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.25■□□□□ 0.51
HMGA2P52926 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMGA2P52926 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.25■□□□□ 0.51
HMGA2P52926 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.25■□□□□ 0.51
HMGA2P52926 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMGA2P52926 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMGA2P52926 AP001271.2-201ENST00000624018 1556 ntBASIC18.25■□□□□ 0.51
HMGA2P52926 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.25■□□□□ 0.51
HMGA2P52926 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
HMGA2P52926 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HMGA2P52926 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.24■□□□□ 0.51
HMGA2P52926 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
HMGA2P52926 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HMGA2P52926 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.24■□□□□ 0.51
HMGA2P52926 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HMGA2P52926 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HMGA2P52926 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HMGA2P52926 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.24■□□□□ 0.51
HMGA2P52926 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.24■□□□□ 0.51
HMGA2P52926 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
HMGA2P52926 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HMGA2P52926 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
HMGA2P52926 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.24■□□□□ 0.51
HMGA2P52926 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
HMGA2P52926 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.24■□□□□ 0.51
HMGA2P52926 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.24■□□□□ 0.51
HMGA2P52926 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
HMGA2P52926 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
HMGA2P52926 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HMGA2P52926 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
HMGA2P52926 AL032819.2-201ENST00000624543 2162 ntBASIC18.24■□□□□ 0.51
HMGA2P52926 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HMGA2P52926 KRT16P6-202ENST00000425692 1426 ntBASIC18.23■□□□□ 0.51
HMGA2P52926 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGA2P52926 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
HMGA2P52926 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGA2P52926 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGA2P52926 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.23■□□□□ 0.51
HMGA2P52926 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
HMGA2P52926 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
HMGA2P52926 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGA2P52926 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGA2P52926 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
HMGA2P52926 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.23■□□□□ 0.51
HMGA2P52926 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGA2P52926 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGA2P52926 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.23■□□□□ 0.51
HMGA2P52926 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.23■□□□□ 0.51
HMGA2P52926 TERF1P5-201ENST00000477545 1207 ntBASIC18.23■□□□□ 0.51
HMGA2P52926 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.23■□□□□ 0.51
HMGA2P52926 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
HMGA2P52926 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HMGA2P52926 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HMGA2P52926 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.23■□□□□ 0.51
HMGA2P52926 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGA2P52926 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.23■□□□□ 0.51
HMGA2P52926 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGA2P52926 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
HMGA2P52926 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGA2P52926 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGA2P52926 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
HMGA2P52926 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.22■□□□□ 0.51
HMGA2P52926 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGA2P52926 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.22■□□□□ 0.51
HMGA2P52926 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.22■□□□□ 0.51
HMGA2P52926 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.22■□□□□ 0.51
HMGA2P52926 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGA2P52926 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGA2P52926 UBE2DNL-204ENST00000602536 740 ntBASIC18.22■□□□□ 0.51
HMGA2P52926 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HMGA2P52926 MYCNOS-205ENST00000641950 531 ntBASIC18.22■□□□□ 0.51
HMGA2P52926 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HMGA2P52926 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
HMGA2P52926 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.22■□□□□ 0.51
HMGA2P52926 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGA2P52926 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.22■□□□□ 0.51
HMGA2P52926 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGA2P52926 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HMGA2P52926 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HMGA2P52926 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
HMGA2P52926 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.21■□□□□ 0.51
HMGA2P52926 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
HMGA2P52926 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HMGA2P52926 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HMGA2P52926 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
HMGA2P52926 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
HMGA2P52926 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HMGA2P52926 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.21■□□□□ 0.51
HMGA2P52926 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms