Protein–RNA interactions for Protein: P51801

CLCNKB, Chloride channel protein ClC-Kb, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKBP51801 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.4■■□□□ 1.02
CLCNKBP51801 ARL16-209ENST00000573715 763 ntTSL 3 BASIC21.4■■□□□ 1.02
CLCNKBP51801 ARL16-211ENST00000576135 694 ntTSL 3 BASIC21.4■■□□□ 1.02
CLCNKBP51801 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CLCNKBP51801 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
CLCNKBP51801 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLCNKBP51801 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.4■■□□□ 1.02
CLCNKBP51801 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CLCNKBP51801 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLCNKBP51801 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
CLCNKBP51801 AL135905.2-201ENST00000584934 1404 ntBASIC21.39■■□□□ 1.02
CLCNKBP51801 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CLCNKBP51801 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.39■■□□□ 1.02
CLCNKBP51801 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.39■■□□□ 1.01
CLCNKBP51801 SMG8-203ENST00000578922 2178 ntBASIC21.39■■□□□ 1.01
CLCNKBP51801 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.39■■□□□ 1.01
CLCNKBP51801 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CLCNKBP51801 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC21.39■■□□□ 1.01
CLCNKBP51801 TSPY7P-201ENST00000431358 1114 ntBASIC21.39■■□□□ 1.01
CLCNKBP51801 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC21.39■■□□□ 1.01
CLCNKBP51801 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.39■■□□□ 1.01
CLCNKBP51801 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CLCNKBP51801 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC21.39■■□□□ 1.01
CLCNKBP51801 AL049637.2-201ENST00000641778 930 ntBASIC21.39■■□□□ 1.01
CLCNKBP51801 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CLCNKBP51801 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CLCNKBP51801 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.39■■□□□ 1.01
CLCNKBP51801 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CLCNKBP51801 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CLCNKBP51801 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CLCNKBP51801 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.38■■□□□ 1.01
CLCNKBP51801 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC21.38■■□□□ 1.01
CLCNKBP51801 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLCNKBP51801 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CLCNKBP51801 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLCNKBP51801 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CLCNKBP51801 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CLCNKBP51801 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLCNKBP51801 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.38■■□□□ 1.01
CLCNKBP51801 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC21.38■■□□□ 1.01
CLCNKBP51801 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.38■■□□□ 1.01
CLCNKBP51801 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLCNKBP51801 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLCNKBP51801 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CLCNKBP51801 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
CLCNKBP51801 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CLCNKBP51801 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC21.37■■□□□ 1.01
CLCNKBP51801 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CLCNKBP51801 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC21.37■■□□□ 1.01
CLCNKBP51801 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLCNKBP51801 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.37■■□□□ 1.01
CLCNKBP51801 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLCNKBP51801 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLCNKBP51801 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
CLCNKBP51801 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CLCNKBP51801 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.37■■□□□ 1.01
CLCNKBP51801 KRT16P5-201ENST00000455284 522 ntBASIC21.37■■□□□ 1.01
CLCNKBP51801 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLCNKBP51801 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC21.37■■□□□ 1.01
CLCNKBP51801 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC21.37■■□□□ 1.01
CLCNKBP51801 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
CLCNKBP51801 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CLCNKBP51801 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLCNKBP51801 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLCNKBP51801 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLCNKBP51801 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CLCNKBP51801 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CLCNKBP51801 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CLCNKBP51801 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLCNKBP51801 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLCNKBP51801 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLCNKBP51801 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLCNKBP51801 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.36■■□□□ 1.01
CLCNKBP51801 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
CLCNKBP51801 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLCNKBP51801 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
CLCNKBP51801 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CLCNKBP51801 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC21.36■■□□□ 1.01
CLCNKBP51801 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
CLCNKBP51801 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.36■■□□□ 1.01
CLCNKBP51801 AP001412.1-201ENST00000608405 714 ntBASIC21.36■■□□□ 1.01
CLCNKBP51801 AC113410.3-201ENST00000623366 203 ntBASIC21.36■■□□□ 1.01
CLCNKBP51801 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CLCNKBP51801 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CLCNKBP51801 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
CLCNKBP51801 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLCNKBP51801 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
CLCNKBP51801 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLCNKBP51801 HTR7P1-201ENST00000538670 1336 ntBASIC21.35■■□□□ 1.01
CLCNKBP51801 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.35■■□□□ 1.01
CLCNKBP51801 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLCNKBP51801 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLCNKBP51801 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
CLCNKBP51801 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC21.35■■□□□ 1.01
CLCNKBP51801 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC21.35■■□□□ 1.01
CLCNKBP51801 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC21.35■■□□□ 1.01
CLCNKBP51801 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
CLCNKBP51801 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC21.35■■□□□ 1.01
CLCNKBP51801 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.35■■□□□ 1.01
CLCNKBP51801 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms