Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLCN2P51788 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.3■□□□□ 0.68
CLCN2P51788 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CLCN2P51788 OR10C1-204ENST00000622521 1039 ntBASIC19.3■□□□□ 0.68
CLCN2P51788 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLCN2P51788 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLCN2P51788 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLCN2P51788 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLCN2P51788 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLCN2P51788 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLCN2P51788 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLCN2P51788 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CLCN2P51788 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLCN2P51788 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CLCN2P51788 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLCN2P51788 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLCN2P51788 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLCN2P51788 CDV3P1-201ENST00000471403 739 ntBASIC19.29■□□□□ 0.68
CLCN2P51788 AC105036.2-201ENST00000569468 176 ntBASIC19.29■□□□□ 0.68
CLCN2P51788 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLCN2P51788 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.29■□□□□ 0.68
CLCN2P51788 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
CLCN2P51788 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.29■□□□□ 0.68
CLCN2P51788 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.29■□□□□ 0.68
CLCN2P51788 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CLCN2P51788 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.29■□□□□ 0.68
CLCN2P51788 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLCN2P51788 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.29■□□□□ 0.68
CLCN2P51788 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.29■□□□□ 0.68
CLCN2P51788 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLCN2P51788 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.29■□□□□ 0.68
CLCN2P51788 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CLCN2P51788 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.29■□□□□ 0.68
CLCN2P51788 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CLCN2P51788 AC112907.3-201ENST00000577781 2400 ntBASIC19.29■□□□□ 0.68
CLCN2P51788 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLCN2P51788 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLCN2P51788 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.28■□□□□ 0.68
CLCN2P51788 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLCN2P51788 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLCN2P51788 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CLCN2P51788 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLCN2P51788 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CLCN2P51788 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLCN2P51788 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLCN2P51788 SLC29A4P1-201ENST00000398760 971 ntBASIC19.28■□□□□ 0.68
CLCN2P51788 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.28■□□□□ 0.68
CLCN2P51788 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLCN2P51788 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
CLCN2P51788 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLCN2P51788 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLCN2P51788 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLCN2P51788 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLCN2P51788 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLCN2P51788 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLCN2P51788 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLCN2P51788 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLCN2P51788 AC011484.1-201ENST00000377652 1995 ntBASIC19.28■□□□□ 0.68
CLCN2P51788 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLCN2P51788 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CLCN2P51788 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CLCN2P51788 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CLCN2P51788 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CLCN2P51788 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CLCN2P51788 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CLCN2P51788 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLCN2P51788 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLCN2P51788 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CLCN2P51788 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLCN2P51788 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CLCN2P51788 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CLCN2P51788 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLCN2P51788 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CLCN2P51788 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CLCN2P51788 TSPY6P-201ENST00000448518 926 ntBASIC19.27■□□□□ 0.68
CLCN2P51788 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.27■□□□□ 0.68
CLCN2P51788 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.27■□□□□ 0.68
CLCN2P51788 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.27■□□□□ 0.67
CLCN2P51788 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CLCN2P51788 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CLCN2P51788 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCN2P51788 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLCN2P51788 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLCN2P51788 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.26■□□□□ 0.67
CLCN2P51788 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CLCN2P51788 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLCN2P51788 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCN2P51788 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLCN2P51788 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.26■□□□□ 0.67
CLCN2P51788 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCN2P51788 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLCN2P51788 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.26■□□□□ 0.67
CLCN2P51788 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.26■□□□□ 0.67
CLCN2P51788 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CLCN2P51788 AL512625.2-201ENST00000417533 625 ntBASIC19.26■□□□□ 0.67
CLCN2P51788 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCN2P51788 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.26■□□□□ 0.67
CLCN2P51788 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLCN2P51788 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.26■□□□□ 0.67
CLCN2P51788 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms