Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB5CP51148 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB5CP51148 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
RAB5CP51148 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.06■□□□□ 0.16
RAB5CP51148 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB5CP51148 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB5CP51148 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB5CP51148 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB5CP51148 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.06■□□□□ 0.16
RAB5CP51148 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAB5CP51148 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RAB5CP51148 STK25-204ENST00000405585 1643 ntTSL 2 BASIC16.06■□□□□ 0.16
RAB5CP51148 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB5CP51148 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB5CP51148 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB5CP51148 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC16.06■□□□□ 0.16
RAB5CP51148 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
RAB5CP51148 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC16.06■□□□□ 0.16
RAB5CP51148 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB5CP51148 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAB5CP51148 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB5CP51148 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB5CP51148 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.06■□□□□ 0.16
RAB5CP51148 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
RAB5CP51148 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB5CP51148 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.06■□□□□ 0.16
RAB5CP51148 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAB5CP51148 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB5CP51148 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAB5CP51148 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
RAB5CP51148 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.05■□□□□ 0.16
RAB5CP51148 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.05■□□□□ 0.16
RAB5CP51148 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB5CP51148 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB5CP51148 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RAB5CP51148 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
RAB5CP51148 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB5CP51148 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB5CP51148 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RAB5CP51148 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC16.05■□□□□ 0.16
RAB5CP51148 ABHD17AP3-201ENST00000503096 1137 ntBASIC16.05■□□□□ 0.16
RAB5CP51148 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC16.05■□□□□ 0.16
RAB5CP51148 MIR4508-201ENST00000584178 70 ntBASIC16.05■□□□□ 0.16
RAB5CP51148 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC16.05■□□□□ 0.16
RAB5CP51148 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB5CP51148 AL691432.2-201ENST00000607222 2038 ntBASIC16.05■□□□□ 0.16
RAB5CP51148 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RAB5CP51148 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RAB5CP51148 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
RAB5CP51148 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.05■□□□□ 0.16
RAB5CP51148 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB5CP51148 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.05■□□□□ 0.16
RAB5CP51148 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB5CP51148 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
RAB5CP51148 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB5CP51148 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB5CP51148 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC16.04■□□□□ 0.16
RAB5CP51148 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RAB5CP51148 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RAB5CP51148 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB5CP51148 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RAB5CP51148 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.04■□□□□ 0.16
RAB5CP51148 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB5CP51148 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.04■□□□□ 0.16
RAB5CP51148 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB5CP51148 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RAB5CP51148 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB5CP51148 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC16.04■□□□□ 0.16
RAB5CP51148 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB5CP51148 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RAB5CP51148 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RAB5CP51148 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
RAB5CP51148 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB5CP51148 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
RAB5CP51148 STK25-205ENST00000405883 1904 ntTSL 2 BASIC16.04■□□□□ 0.16
RAB5CP51148 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB5CP51148 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RAB5CP51148 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
RAB5CP51148 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB5CP51148 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB5CP51148 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB5CP51148 AC021242.3-201ENST00000607598 1377 ntBASIC16.03■□□□□ 0.16
RAB5CP51148 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB5CP51148 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB5CP51148 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
RAB5CP51148 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RAB5CP51148 BEX3-202ENST00000372634 753 ntTSL 2 BASIC16.03■□□□□ 0.16
RAB5CP51148 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC16.03■□□□□ 0.16
RAB5CP51148 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
RAB5CP51148 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB5CP51148 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB5CP51148 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB5CP51148 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB5CP51148 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB5CP51148 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB5CP51148 AL390961.4-201ENST00000623958 2535 ntBASIC16.03■□□□□ 0.16
RAB5CP51148 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB5CP51148 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAB5CP51148 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RAB5CP51148 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms