Protein–RNA interactions for Protein: P42900

SLS1, Sigma-like sequence protein 1, mitochondrial, yeastyeast

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SLS1P42900 COG6YNL041C 2520 nt1.76□□□□□ -2.13
SLS1P42900 YGR146C-AYGR146C-A 162 nt1.76□□□□□ -2.13
SLS1P42900 SWI4YER111C 3282 nt1.76□□□□□ -2.13
SLS1P42900 YMR045CYMR045C 5268 nt1.75□□□□□ -2.13
SLS1P42900 BPH1YCR032W 6504 nt1.75□□□□□ -2.13
SLS1P42900 APL3YBL037W 3078 nt1.75□□□□□ -2.13
SLS1P42900 BIR1YJR089W 2865 nt1.75□□□□□ -2.13
SLS1P42900 snR81snR81 201 nt1.73□□□□□ -2.13
SLS1P42900 YNL266WYNL266W 420 nt1.73□□□□□ -2.13
SLS1P42900 YBR200W-AYBR200W-A 165 nt1.73□□□□□ -2.13
SLS1P42900 SEC1YDR164C 2175 nt1.72□□□□□ -2.13
SLS1P42900 SEC3YER008C 4011 nt1.72□□□□□ -2.13
SLS1P42900 YAL037C-AYAL037C-A 93 nt1.72□□□□□ -2.13
SLS1P42900 NUP145YGL092W 3954 nt1.72□□□□□ -2.13
SLS1P42900 ASE1YOR058C 2658 nt1.71□□□□□ -2.14
SLS1P42900 GEA2YEL022W 4380 nt1.71□□□□□ -2.14
SLS1P42900 YLL066W-BYLL066W-B 171 nt1.71□□□□□ -2.14
SLS1P42900 YBR072C-AYBR072C-A 162 nt1.7□□□□□ -2.14
SLS1P42900 SAC3YDR159W 3906 nt1.7□□□□□ -2.14
SLS1P42900 FIG2YCR089W 4830 nt1.7□□□□□ -2.14
SLS1P42900 MON2YNL297C 4911 nt1.7□□□□□ -2.14
SLS1P42900 YOR093CYOR093C 4947 nt1.69□□□□□ -2.14
SLS1P42900 DNF3YMR162C 4971 nt1.69□□□□□ -2.14
SLS1P42900 IRC20YLR247C 4671 nt1.69□□□□□ -2.14
SLS1P42900 BST1YFL025C 3090 nt1.68□□□□□ -2.14
SLS1P42900 SEC8YPR055W 3198 nt1.67□□□□□ -2.14
SLS1P42900 tT(UGU)HtT(UGU)H 72 nt1.67□□□□□ -2.14
SLS1P42900 PKH3YDR466W 2697 nt1.67□□□□□ -2.14
SLS1P42900 snR45snR45 172 nt1.65□□□□□ -2.15
SLS1P42900 CLU1YMR012W 3834 nt1.65□□□□□ -2.15
SLS1P42900 BEM3YPL115C 3387 nt1.64□□□□□ -2.15
SLS1P42900 AZF1YOR113W 2745 nt1.63□□□□□ -2.15
SLS1P42900 YLR399W-AYLR399W-A 105 nt1.63□□□□□ -2.15
SLS1P42900 YMR247W-AYMR247W-A 144 nt1.63□□□□□ -2.15
SLS1P42900 PRP16YKR086W 3216 nt1.63□□□□□ -2.15
SLS1P42900 PEP1YBL017C 4740 nt1.62□□□□□ -2.15
SLS1P42900 snR62snR62 100 nt1.6□□□□□ -2.15
SLS1P42900 YMR272W-BYMR272W-B 108 nt1.6□□□□□ -2.15
SLS1P42900 PMD1YER132C 5262 nt1.6□□□□□ -2.15
SLS1P42900 NUP188YML103C 4968 nt1.59□□□□□ -2.15
SLS1P42900 TRM732YMR259C 4263 nt1.59□□□□□ -2.15
SLS1P42900 EST2YLR318W 2655 nt1.59□□□□□ -2.16
SLS1P42900 YDL073WYDL073W 2955 nt1.59□□□□□ -2.16
SLS1P42900 NUP192YJL039C 5052 nt1.58□□□□□ -2.16
SLS1P42900 YOL083C-AYOL083C-A 141 nt1.58□□□□□ -2.16
SLS1P42900 YSP1YHR155W 3687 nt1.57□□□□□ -2.16
SLS1P42900 YBR196C-AYBR196C-A 150 nt1.57□□□□□ -2.16
SLS1P42900 MSN5YDR335W 3675 nt1.56□□□□□ -2.16
SLS1P42900 ANS1YHR126C 480 nt1.56□□□□□ -2.16
SLS1P42900 YPR160W-AYPR160W-A 81 nt1.56□□□□□ -2.16
SLS1P42900 CFT1YDR301W 4074 nt1.55□□□□□ -2.16
SLS1P42900 VPS15YBR097W 4365 nt1.54□□□□□ -2.16
SLS1P42900 UBP3YER151C 2739 nt1.53□□□□□ -2.16
SLS1P42900 tN(GUU)QtN(GUU)Q 71 nt1.52□□□□□ -2.17
SLS1P42900 YBL071C-BYBL071C-B 99 nt1.51□□□□□ -2.17
SLS1P42900 GLG1YKR058W 1851 nt1.51□□□□□ -2.17
SLS1P42900 MEC1YBR136W 7107 nt1.5□□□□□ -2.17
SLS1P42900 IRA1YBR140C 9279 nt1.5□□□□□ -2.17
SLS1P42900 SXM1YDR395W 2835 nt1.49□□□□□ -2.17
SLS1P42900 ULP2YIL031W 3105 nt1.49□□□□□ -2.17
SLS1P42900 YBL100W-CYBL100W-C 120 nt1.49□□□□□ -2.17
SLS1P42900 CDC39YCR093W 6327 nt1.49□□□□□ -2.17
SLS1P42900 SEC10YLR166C 2616 nt1.49□□□□□ -2.17
SLS1P42900 NNF2YGR089W 2811 nt1.48□□□□□ -2.17
SLS1P42900 RPS26AYGL189C 360 nt1.44□□□□□ -2.18
SLS1P42900 SPC110YDR356W 2835 nt1.43□□□□□ -2.18
SLS1P42900 PIK1YNL267W 3201 nt1.41□□□□□ -2.18
SLS1P42900 MSH3YCR092C 3057 nt1.41□□□□□ -2.18
SLS1P42900 YOL164W-AYOL164W-A 183 nt1.4□□□□□ -2.19
SLS1P42900 YDR034C-AYDR034C-A 177 nt1.39□□□□□ -2.19
SLS1P42900 PET127YOR017W 2403 nt1.38□□□□□ -2.19
SLS1P42900 BRR2YER172C 6492 nt1.38□□□□□ -2.19
SLS1P42900 FYV8YGR196C 2454 nt1.38□□□□□ -2.19
SLS1P42900 YGR240C-AYGR240C-A 201 nt1.38□□□□□ -2.19
SLS1P42900 YLR286W-AYLR286W-A 135 nt1.38□□□□□ -2.19
SLS1P42900 CAT8YMR280C 4302 nt1.38□□□□□ -2.19
SLS1P42900 SSK2YNR031C 4740 nt1.37□□□□□ -2.19
SLS1P42900 tD(GUC)QtD(GUC)Q 75 nt1.35□□□□□ -2.19
SLS1P42900 HKR1YDR420W 5409 nt1.33□□□□□ -2.2
SLS1P42900 CCH1YGR217W 6120 nt1.33□□□□□ -2.2
SLS1P42900 tQ(UUG)E2tQ(UUG)E2 72 nt1.32□□□□□ -2.2
SLS1P42900 HUG1YML058W-A 207 nt1.31□□□□□ -2.2
SLS1P42900 YGR130CYGR130C 2451 nt1.31□□□□□ -2.2
SLS1P42900 CSE1YGL238W 2883 nt1.3□□□□□ -2.2
SLS1P42900 snR69snR69 101 nt1.3□□□□□ -2.2
SLS1P42900 YLL006W-AYLL006W-A 177 nt1.3□□□□□ -2.2
SLS1P42900 LAA1YJL207C 6045 nt1.3□□□□□ -2.2
SLS1P42900 EST1YLR233C 2100 nt1.3□□□□□ -2.2
SLS1P42900 SPT7YBR081C 3999 nt1.29□□□□□ -2.2
SLS1P42900 YLR299C-AYLR299C-A 93 nt1.27□□□□□ -2.21
SLS1P42900 snR47snR47 99 nt1.26□□□□□ -2.21
SLS1P42900 RDS3YPR094W 324 nt1.25□□□□□ -2.21
SLS1P42900 YDL159C-BYDL159C-B 177 nt1.24□□□□□ -2.21
SLS1P42900 YJL077W-AYJL077W-A 87 nt1.24□□□□□ -2.21
SLS1P42900 YPL060C-AYPL060C-A 3315 nt1.24□□□□□ -2.21
SLS1P42900 NIP1YMR309C 2439 nt1.21□□□□□ -2.22
SLS1P42900 SIP4YJL089W 2490 nt1.21□□□□□ -2.22
SLS1P42900 NST1YNL091W 3723 nt1.2□□□□□ -2.22
SLS1P42900 IML1YJR138W 4755 nt1.2□□□□□ -2.22
SLS1P42900 BUL2YML111W 2763 nt1.19□□□□□ -2.22
Retrieved 100 of 7,029 protein–RNA pairs in 70.5 ms