Protein–RNA interactions for Protein: P38889

SKN7, Transcription factor SKN7, yeastyeast

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SKN7P38889 GCN2YDR283C 4980 nt2.02□□□□□ -2.09
SKN7P38889 snR38snR38 95 nt2.01□□□□□ -2.09
SKN7P38889 MSH6YDR097C 3729 nt2.01□□□□□ -2.09
SKN7P38889 SYH1YPL105C 2550 nt2.01□□□□□ -2.09
SKN7P38889 SSD1YDR293C 3753 nt2□□□□□ -2.09
SKN7P38889 HIR3YJR140C 4947 nt2□□□□□ -2.09
SKN7P38889 ANS1YHR126C 480 nt2□□□□□ -2.09
SKN7P38889 YHR180W-AYHR180W-A 183 nt2□□□□□ -2.09
SKN7P38889 SFB2YNL049C 2631 nt2□□□□□ -2.09
SKN7P38889 RTT101YJL047C 2529 nt1.99□□□□□ -2.09
SKN7P38889 YAR009CYAR009C 3591 nt1.99□□□□□ -2.09
SKN7P38889 YHR180C-BYHR180C-B 105 nt1.98□□□□□ -2.09
SKN7P38889 YJL052C-AYJL052C-A 120 nt1.98□□□□□ -2.09
SKN7P38889 YML054C-AYML054C-A 159 nt1.98□□□□□ -2.09
SKN7P38889 TOR2YKL203C 7425 nt1.97□□□□□ -2.09
SKN7P38889 AI1Q0050 2505 nt1.97□□□□□ -2.09
SKN7P38889 YDL159C-BYDL159C-B 177 nt1.97□□□□□ -2.09
SKN7P38889 YBR296C-AYBR296C-A 120 nt1.97□□□□□ -2.09
SKN7P38889 RAD50YNL250W 3939 nt1.97□□□□□ -2.09
SKN7P38889 USO1YDL058W 5373 nt1.96□□□□□ -2.1
SKN7P38889 UTP22YGR090W 3714 nt1.96□□□□□ -2.1
SKN7P38889 YMR045CYMR045C 5268 nt1.96□□□□□ -2.1
SKN7P38889 RAD9YDR217C 3930 nt1.96□□□□□ -2.1
SKN7P38889 YLR419WYLR419W 4308 nt1.95□□□□□ -2.1
SKN7P38889 UBP2YOR124C 3819 nt1.95□□□□□ -2.1
SKN7P38889 GEA2YEL022W 4380 nt1.94□□□□□ -2.1
SKN7P38889 YDL073WYDL073W 2955 nt1.94□□□□□ -2.1
SKN7P38889 MYO2YOR326W 4725 nt1.94□□□□□ -2.1
SKN7P38889 CHS1YNL192W 3396 nt1.92□□□□□ -2.1
SKN7P38889 YHR214C-BYHR214C-B 5382 nt1.92□□□□□ -2.1
SKN7P38889 PAN2YGL094C 3348 nt1.92□□□□□ -2.1
SKN7P38889 EST1YLR233C 2100 nt1.91□□□□□ -2.1
SKN7P38889 PET127YOR017W 2403 nt1.91□□□□□ -2.1
SKN7P38889 TRM3YDL112W 4311 nt1.91□□□□□ -2.1
SKN7P38889 YPR160W-AYPR160W-A 81 nt1.91□□□□□ -2.1
SKN7P38889 PET111YMR257C 2403 nt1.9□□□□□ -2.1
SKN7P38889 UTP21YLR409C 2820 nt1.9□□□□□ -2.11
SKN7P38889 DGR1YNL130C-A 147 nt1.9□□□□□ -2.11
SKN7P38889 snR14snR14 160 nt1.9□□□□□ -2.11
SKN7P38889 ATG9YDL149W 2994 nt1.9□□□□□ -2.11
SKN7P38889 SAC3YDR159W 3906 nt1.9□□□□□ -2.11
SKN7P38889 NIP1YMR309C 2439 nt1.89□□□□□ -2.11
SKN7P38889 HER1YOR227W 3741 nt1.89□□□□□ -2.11
SKN7P38889 NUT1YGL151W 3399 nt1.87□□□□□ -2.11
SKN7P38889 snR69snR69 101 nt1.87□□□□□ -2.11
SKN7P38889 UBR2YLR024C 5619 nt1.86□□□□□ -2.11
SKN7P38889 PRP16YKR086W 3216 nt1.86□□□□□ -2.11
SKN7P38889 SPP41YDR464W 4308 nt1.86□□□□□ -2.11
SKN7P38889 SMC4YLR086W 4257 nt1.85□□□□□ -2.11
SKN7P38889 IRC20YLR247C 4671 nt1.84□□□□□ -2.11
SKN7P38889 FKS1YLR342W 5631 nt1.84□□□□□ -2.11
SKN7P38889 KIP1YBL063W 3336 nt1.84□□□□□ -2.11
SKN7P38889 FAB1YFR019W 6837 nt1.84□□□□□ -2.12
SKN7P38889 SXM1YDR395W 2835 nt1.83□□□□□ -2.12
SKN7P38889 NEO1YIL048W 3456 nt1.82□□□□□ -2.12
SKN7P38889 PKH3YDR466W 2697 nt1.82□□□□□ -2.12
SKN7P38889 MYO4YAL029C 4416 nt1.82□□□□□ -2.12
SKN7P38889 STO1YMR125W 2586 nt1.81□□□□□ -2.12
SKN7P38889 tN(GUU)QtN(GUU)Q 71 nt1.81□□□□□ -2.12
SKN7P38889 TMA7YLR262C-A 195 nt1.81□□□□□ -2.12
SKN7P38889 RDS3YPR094W 324 nt1.81□□□□□ -2.12
SKN7P38889 CSE1YGL238W 2883 nt1.8□□□□□ -2.12
SKN7P38889 EMC5YIL027C 426 nt1.79□□□□□ -2.12
SKN7P38889 SEC31YDL195W 3822 nt1.78□□□□□ -2.12
SKN7P38889 TDA9YML081W 3756 nt1.78□□□□□ -2.12
SKN7P38889 YOR093CYOR093C 4947 nt1.77□□□□□ -2.13
SKN7P38889 EST2YLR318W 2655 nt1.75□□□□□ -2.13
SKN7P38889 DNF3YMR162C 4971 nt1.74□□□□□ -2.13
SKN7P38889 KAP122YGL016W 3246 nt1.72□□□□□ -2.13
SKN7P38889 HUG1YML058W-A 207 nt1.71□□□□□ -2.14
SKN7P38889 SEC8YPR055W 3198 nt1.7□□□□□ -2.14
SKN7P38889 APL3YBL037W 3078 nt1.7□□□□□ -2.14
SKN7P38889 FIG2YCR089W 4830 nt1.69□□□□□ -2.14
SKN7P38889 PAU12YGR294W 363 nt1.68□□□□□ -2.14
SKN7P38889 MYO1YHR023W 5787 nt1.68□□□□□ -2.14
SKN7P38889 MSH3YCR092C 3057 nt1.68□□□□□ -2.14
SKN7P38889 YSP1YHR155W 3687 nt1.67□□□□□ -2.14
SKN7P38889 ULP2YIL031W 3105 nt1.66□□□□□ -2.14
SKN7P38889 YLR399W-AYLR399W-A 105 nt1.65□□□□□ -2.15
SKN7P38889 YMR272W-BYMR272W-B 108 nt1.65□□□□□ -2.15
SKN7P38889 MON2YNL297C 4911 nt1.65□□□□□ -2.15
SKN7P38889 VPS15YBR097W 4365 nt1.65□□□□□ -2.15
SKN7P38889 PMD1YER132C 5262 nt1.64□□□□□ -2.15
SKN7P38889 tQ(UUG)QtQ(UUG)Q 76 nt1.63□□□□□ -2.15
SKN7P38889 ROM2YLR371W 4071 nt1.62□□□□□ -2.15
SKN7P38889 SIP4YJL089W 2490 nt1.62□□□□□ -2.15
SKN7P38889 YOR376W-AYOR376W-A 156 nt1.61□□□□□ -2.15
SKN7P38889 BUL2YML111W 2763 nt1.6□□□□□ -2.15
SKN7P38889 YMR247W-AYMR247W-A 144 nt1.6□□□□□ -2.15
SKN7P38889 PEP1YBL017C 4740 nt1.6□□□□□ -2.15
SKN7P38889 FYV8YGR196C 2454 nt1.6□□□□□ -2.15
SKN7P38889 tT(UGU)HtT(UGU)H 72 nt1.59□□□□□ -2.15
SKN7P38889 YJL077W-AYJL077W-A 87 nt1.59□□□□□ -2.15
SKN7P38889 NUP192YJL039C 5052 nt1.55□□□□□ -2.16
SKN7P38889 YLR422WYLR422W 5799 nt1.55□□□□□ -2.16
SKN7P38889 SKI3YPR189W 4299 nt1.55□□□□□ -2.16
SKN7P38889 SEC3YER008C 4011 nt1.54□□□□□ -2.16
SKN7P38889 CFT1YDR301W 4074 nt1.53□□□□□ -2.16
SKN7P38889 YDL114W-AYDL114W-A 114 nt1.53□□□□□ -2.16
SKN7P38889 NST1YNL091W 3723 nt1.53□□□□□ -2.17
Retrieved 100 of 7,029 protein–RNA pairs in 19.5 ms