Protein–RNA interactions for Protein: P38165

RTG3, Retrograde regulation protein 3, yeastyeast

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTG3P38165 PSD2YGR170W 3417 nt2.78□□□□□ -1.96
RTG3P38165 KIP1YBL063W 3336 nt2.78□□□□□ -1.97
RTG3P38165 YDL159W-AYDL159W-A 132 nt2.77□□□□□ -1.97
RTG3P38165 ANS1YHR126C 480 nt2.77□□□□□ -1.97
RTG3P38165 HSL1YKL101W 4557 nt2.76□□□□□ -1.97
RTG3P38165 SPF1YEL031W 3648 nt2.75□□□□□ -1.97
RTG3P38165 KRE33YNL132W 3171 nt2.75□□□□□ -1.97
RTG3P38165 ESC1YMR219W 4977 nt2.74□□□□□ -1.97
RTG3P38165 BRE1YDL074C 2103 nt2.74□□□□□ -1.97
RTG3P38165 YLR422WYLR422W 5799 nt2.73□□□□□ -1.97
RTG3P38165 BEM3YPL115C 3387 nt2.71□□□□□ -1.98
RTG3P38165 DGR1YNL130C-A 147 nt2.71□□□□□ -1.98
RTG3P38165 SKI7YOR076C 2244 nt2.7□□□□□ -1.98
RTG3P38165 RPL41AYDL184C 78 nt2.7□□□□□ -1.98
RTG3P38165 YDL159C-BYDL159C-B 177 nt2.68□□□□□ -1.98
RTG3P38165 YPR160W-AYPR160W-A 81 nt2.68□□□□□ -1.98
RTG3P38165 PKH3YDR466W 2697 nt2.68□□□□□ -1.98
RTG3P38165 SAC3YDR159W 3906 nt2.68□□□□□ -1.98
RTG3P38165 YCS4YLR272C 3531 nt2.67□□□□□ -1.98
RTG3P38165 snR14snR14 160 nt2.67□□□□□ -1.98
RTG3P38165 YBR296C-AYBR296C-A 120 nt2.66□□□□□ -1.98
RTG3P38165 SPP41YDR464W 4308 nt2.65□□□□□ -1.99
RTG3P38165 SEC31YDL195W 3822 nt2.65□□□□□ -1.99
RTG3P38165 YHR180C-BYHR180C-B 105 nt2.65□□□□□ -1.99
RTG3P38165 snR38snR38 95 nt2.65□□□□□ -1.99
RTG3P38165 KOG1YHR186C 4674 nt2.65□□□□□ -1.99
RTG3P38165 YOL098CYOL098C 3114 nt2.65□□□□□ -1.99
RTG3P38165 STH1YIL126W 4080 nt2.65□□□□□ -1.99
RTG3P38165 AI1Q0050 2505 nt2.65□□□□□ -1.99
RTG3P38165 EST1YLR233C 2100 nt2.64□□□□□ -1.99
RTG3P38165 CDC25YLR310C 4770 nt2.63□□□□□ -1.99
RTG3P38165 KAP122YGL016W 3246 nt2.63□□□□□ -1.99
RTG3P38165 STO1YMR125W 2586 nt2.62□□□□□ -1.99
RTG3P38165 YGR122C-AYGR122C-A 129 nt2.62□□□□□ -1.99
RTG3P38165 YML054C-AYML054C-A 159 nt2.62□□□□□ -1.99
RTG3P38165 PET127YOR017W 2403 nt2.62□□□□□ -1.99
RTG3P38165 HER1YOR227W 3741 nt2.61□□□□□ -1.99
RTG3P38165 snR69snR69 101 nt2.6□□□□□ -1.99
RTG3P38165 SEC8YPR055W 3198 nt2.59□□□□□ -1.99
RTG3P38165 SIR4YDR227W 4077 nt2.59□□□□□ -2
RTG3P38165 ULP2YIL031W 3105 nt2.59□□□□□ -2
RTG3P38165 PRP16YKR086W 3216 nt2.58□□□□□ -2
RTG3P38165 NIP1YMR309C 2439 nt2.57□□□□□ -2
RTG3P38165 SMC4YLR086W 4257 nt2.56□□□□□ -2
RTG3P38165 YSP1YHR155W 3687 nt2.56□□□□□ -2
RTG3P38165 YLR419WYLR419W 4308 nt2.56□□□□□ -2
RTG3P38165 SEC3YER008C 4011 nt2.55□□□□□ -2
RTG3P38165 TOR1YJR066W 7413 nt2.55□□□□□ -2
RTG3P38165 KCS1YDR017C 3153 nt2.55□□□□□ -2
RTG3P38165 GEA2YEL022W 4380 nt2.54□□□□□ -2
RTG3P38165 RDS3YPR094W 324 nt2.54□□□□□ -2
RTG3P38165 tN(GUU)QtN(GUU)Q 71 nt2.53□□□□□ -2
RTG3P38165 MYO4YAL029C 4416 nt2.52□□□□□ -2.01
RTG3P38165 YLR399W-AYLR399W-A 105 nt2.52□□□□□ -2.01
RTG3P38165 NEO1YIL048W 3456 nt2.52□□□□□ -2.01
RTG3P38165 SXM1YDR395W 2835 nt2.51□□□□□ -2.01
RTG3P38165 PEP1YBL017C 4740 nt2.51□□□□□ -2.01
RTG3P38165 CSE1YGL238W 2883 nt2.51□□□□□ -2.01
RTG3P38165 NST1YNL091W 3723 nt2.51□□□□□ -2.01
RTG3P38165 YPL060C-AYPL060C-A 3315 nt2.5□□□□□ -2.01
RTG3P38165 TRA1YHR099W 11235 nt2.49□□□□□ -2.01
RTG3P38165 SKI3YPR189W 4299 nt2.49□□□□□ -2.01
RTG3P38165 IRC20YLR247C 4671 nt2.49□□□□□ -2.01
RTG3P38165 IRA2YOL081W 9240 nt2.49□□□□□ -2.01
RTG3P38165 SEC16YPL085W 6588 nt2.49□□□□□ -2.01
RTG3P38165 UBR2YLR024C 5619 nt2.48□□□□□ -2.01
RTG3P38165 UBP2YOR124C 3819 nt2.47□□□□□ -2.01
RTG3P38165 CSF1YLR087C 8877 nt2.47□□□□□ -2.01
RTG3P38165 YMR272W-BYMR272W-B 108 nt2.46□□□□□ -2.02
RTG3P38165 APL3YBL037W 3078 nt2.45□□□□□ -2.02
RTG3P38165 MSN5YDR335W 3675 nt2.45□□□□□ -2.02
RTG3P38165 MSH3YCR092C 3057 nt2.4□□□□□ -2.03
RTG3P38165 YHR180W-AYHR180W-A 183 nt2.4□□□□□ -2.03
RTG3P38165 BPH1YCR032W 6504 nt2.38□□□□□ -2.03
RTG3P38165 ATG9YDL149W 2994 nt2.38□□□□□ -2.03
RTG3P38165 SWI4YER111C 3282 nt2.37□□□□□ -2.03
RTG3P38165 BNI1YNL271C 5862 nt2.36□□□□□ -2.03
RTG3P38165 HUG1YML058W-A 207 nt2.36□□□□□ -2.03
RTG3P38165 YJL077W-AYJL077W-A 87 nt2.35□□□□□ -2.03
RTG3P38165 USO1YDL058W 5373 nt2.34□□□□□ -2.04
RTG3P38165 PET111YMR257C 2403 nt2.33□□□□□ -2.04
RTG3P38165 NUP145YGL092W 3954 nt2.32□□□□□ -2.04
RTG3P38165 FKS1YLR342W 5631 nt2.32□□□□□ -2.04
RTG3P38165 PAU12YGR294W 363 nt2.3□□□□□ -2.04
RTG3P38165 SIP4YJL089W 2490 nt2.3□□□□□ -2.04
RTG3P38165 TOR2YKL203C 7425 nt2.28□□□□□ -2.04
RTG3P38165 EST2YLR318W 2655 nt2.27□□□□□ -2.05
RTG3P38165 FAB1YFR019W 6837 nt2.27□□□□□ -2.05
RTG3P38165 BUL2YML111W 2763 nt2.27□□□□□ -2.05
RTG3P38165 CFT1YDR301W 4074 nt2.25□□□□□ -2.05
RTG3P38165 CAT8YMR280C 4302 nt2.25□□□□□ -2.05
RTG3P38165 TRM732YMR259C 4263 nt2.23□□□□□ -2.05
RTG3P38165 MON2YNL297C 4911 nt2.2□□□□□ -2.06
RTG3P38165 BRR2YER172C 6492 nt2.18□□□□□ -2.06
RTG3P38165 tQ(UUG)QtQ(UUG)Q 76 nt2.18□□□□□ -2.06
RTG3P38165 FYV8YGR196C 2454 nt2.18□□□□□ -2.06
RTG3P38165 YHR214C-BYHR214C-B 5382 nt2.18□□□□□ -2.06
RTG3P38165 YLL006W-AYLL006W-A 177 nt2.16□□□□□ -2.06
RTG3P38165 CDC39YCR093W 6327 nt2.15□□□□□ -2.07
RTG3P38165 NUP188YML103C 4968 nt2.15□□□□□ -2.07
Retrieved 100 of 7,029 protein–RNA pairs in 38.5 ms