Protein–RNA interactions for Protein: P28007

GAR1, H/ACA ribonucleoprotein complex subunit GAR1, yeastyeast

Known RBP Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
GAR1P28007 YMR050CYMR050C 5268 nt2.18□□□□□ -2.06
GAR1P28007 YOL103W-BYOL103W-B 5268 nt2.18□□□□□ -2.06
GAR1P28007 YBR012W-BYBR012W-B 5271 nt2.18□□□□□ -2.06
GAR1P28007 YOR142W-BYOR142W-B 5268 nt2.18□□□□□ -2.06
GAR1P28007 YPL257W-BYPL257W-B 5268 nt2.18□□□□□ -2.06
GAR1P28007 YPR158W-BYPR158W-B 5271 nt2.18□□□□□ -2.06
GAR1P28007 SEC8YPR055W 3198 nt2.18□□□□□ -2.06
GAR1P28007 SEC3YER008C 4011 nt2.17□□□□□ -2.06
GAR1P28007 SSD1YDR293C 3753 nt2.17□□□□□ -2.06
GAR1P28007 SIR4YDR227W 4077 nt2.17□□□□□ -2.06
GAR1P28007 RTT101YJL047C 2529 nt2.17□□□□□ -2.06
GAR1P28007 GYP5YPL249C 2685 nt2.15□□□□□ -2.06
GAR1P28007 CSE1YGL238W 2883 nt2.15□□□□□ -2.07
GAR1P28007 YDL114W-AYDL114W-A 114 nt2.13□□□□□ -2.07
GAR1P28007 tV(UAC)QtV(UAC)Q 76 nt2.13□□□□□ -2.07
GAR1P28007 VPS13YLL040C 9435 nt2.13□□□□□ -2.07
GAR1P28007 PSD2YGR170W 3417 nt2.12□□□□□ -2.07
GAR1P28007 UBR1YGR184C 5853 nt2.12□□□□□ -2.07
GAR1P28007 FKS3YMR306W 5358 nt2.12□□□□□ -2.07
GAR1P28007 YJL052C-AYJL052C-A 120 nt2.11□□□□□ -2.07
GAR1P28007 YLR422WYLR422W 5799 nt2.11□□□□□ -2.07
GAR1P28007 SYH1YPL105C 2550 nt2.1□□□□□ -2.07
GAR1P28007 KOG1YHR186C 4674 nt2.09□□□□□ -2.07
GAR1P28007 IRC20YLR247C 4671 nt2.09□□□□□ -2.07
GAR1P28007 DGR1YNL130C-A 147 nt2.09□□□□□ -2.07
GAR1P28007 KIP1YBL063W 3336 nt2.08□□□□□ -2.08
GAR1P28007 IRE1YHR079C 3348 nt2.07□□□□□ -2.08
GAR1P28007 MSB1YOR188W 3414 nt2.07□□□□□ -2.08
GAR1P28007 MSN5YDR335W 3675 nt2.07□□□□□ -2.08
GAR1P28007 HIR3YJR140C 4947 nt2.06□□□□□ -2.08
GAR1P28007 YEF3YLR249W 3135 nt2.06□□□□□ -2.08
GAR1P28007 tW(CCA)G1tW(CCA)G1 72 nt2.06□□□□□ -2.08
GAR1P28007 tW(CCA)G2tW(CCA)G2 72 nt2.06□□□□□ -2.08
GAR1P28007 tW(CCA)JtW(CCA)J 72 nt2.06□□□□□ -2.08
GAR1P28007 tW(CCA)KtW(CCA)K 72 nt2.06□□□□□ -2.08
GAR1P28007 tW(CCA)MtW(CCA)M 72 nt2.06□□□□□ -2.08
GAR1P28007 tW(CCA)PtW(CCA)P 72 nt2.06□□□□□ -2.08
GAR1P28007 SXM1YDR395W 2835 nt2.05□□□□□ -2.08
GAR1P28007 RAV1YJR033C 4074 nt2.05□□□□□ -2.08
GAR1P28007 SEC16YPL085W 6588 nt2.04□□□□□ -2.08
GAR1P28007 YSP1YHR155W 3687 nt2.04□□□□□ -2.08
GAR1P28007 SPF1YEL031W 3648 nt2.03□□□□□ -2.08
GAR1P28007 CDC25YLR310C 4770 nt2.03□□□□□ -2.08
GAR1P28007 tN(GUU)QtN(GUU)Q 71 nt2.03□□□□□ -2.08
GAR1P28007 HSL1YKL101W 4557 nt2.03□□□□□ -2.08
GAR1P28007 STH1YIL126W 4080 nt2.02□□□□□ -2.09
GAR1P28007 IRA2YOL081W 9240 nt2.02□□□□□ -2.09
GAR1P28007 GIP3YPL137C 3831 nt2.02□□□□□ -2.09
GAR1P28007 CAT8YMR280C 4302 nt2.02□□□□□ -2.09
GAR1P28007 PDR11YIL013C 4236 nt2.02□□□□□ -2.09
GAR1P28007 PET309YLR067C 2898 nt2.01□□□□□ -2.09
GAR1P28007 snR70snR70 164 nt2.01□□□□□ -2.09
GAR1P28007 PAU12YGR294W 363 nt2.01□□□□□ -2.09
GAR1P28007 YJL077W-AYJL077W-A 87 nt2.01□□□□□ -2.09
GAR1P28007 SGS1YMR190C 4344 nt2□□□□□ -2.09
GAR1P28007 UBP2YOR124C 3819 nt1.98□□□□□ -2.09
GAR1P28007 ATG9YDL149W 2994 nt1.98□□□□□ -2.09
GAR1P28007 INO80YGL150C 4470 nt1.97□□□□□ -2.09
GAR1P28007 KAP122YGL016W 3246 nt1.97□□□□□ -2.09
GAR1P28007 UTP21YLR409C 2820 nt1.97□□□□□ -2.09
GAR1P28007 YOL098CYOL098C 3114 nt1.97□□□□□ -2.09
GAR1P28007 NUP170YBL079W 4509 nt1.96□□□□□ -2.1
GAR1P28007 YOR343W-BYOR343W-B 5313 nt1.96□□□□□ -2.1
GAR1P28007 YLR419WYLR419W 4308 nt1.96□□□□□ -2.1
GAR1P28007 CSF1YLR087C 8877 nt1.96□□□□□ -2.1
GAR1P28007 RAD50YNL250W 3939 nt1.95□□□□□ -2.1
GAR1P28007 YBL005W-BYBL005W-B 5268 nt1.95□□□□□ -2.1
GAR1P28007 YLR399W-AYLR399W-A 105 nt1.95□□□□□ -2.1
GAR1P28007 PRP16YKR086W 3216 nt1.94□□□□□ -2.1
GAR1P28007 DNF1YER166W 4716 nt1.94□□□□□ -2.1
GAR1P28007 HUG1YML058W-A 207 nt1.93□□□□□ -2.1
GAR1P28007 CHC1YGL206C 4962 nt1.93□□□□□ -2.1
GAR1P28007 YNL054W-BYNL054W-B 5250 nt1.92□□□□□ -2.1
GAR1P28007 YMR160WYMR160W 2451 nt1.92□□□□□ -2.1
GAR1P28007 YMR045CYMR045C 5268 nt1.91□□□□□ -2.1
GAR1P28007 YHR180W-AYHR180W-A 183 nt1.91□□□□□ -2.1
GAR1P28007 UTP22YGR090W 3714 nt1.9□□□□□ -2.1
GAR1P28007 YER090C-AYER090C-A 90 nt1.88□□□□□ -2.11
GAR1P28007 BNI1YNL271C 5862 nt1.87□□□□□ -2.11
GAR1P28007 tQ(UUG)QtQ(UUG)Q 76 nt1.86□□□□□ -2.11
GAR1P28007 HER1YOR227W 3741 nt1.86□□□□□ -2.11
GAR1P28007 GEA2YEL022W 4380 nt1.85□□□□□ -2.11
GAR1P28007 YKL106C-AYKL106C-A 120 nt1.84□□□□□ -2.11
GAR1P28007 USO1YDL058W 5373 nt1.83□□□□□ -2.12
GAR1P28007 NUP192YJL039C 5052 nt1.82□□□□□ -2.12
GAR1P28007 FYV8YGR196C 2454 nt1.81□□□□□ -2.12
GAR1P28007 FKS1YLR342W 5631 nt1.81□□□□□ -2.12
GAR1P28007 MLP2YIL149C 5040 nt1.79□□□□□ -2.12
GAR1P28007 BPH1YCR032W 6504 nt1.78□□□□□ -2.12
GAR1P28007 snR67snR67 82 nt1.76□□□□□ -2.13
GAR1P28007 SMC4YLR086W 4257 nt1.76□□□□□ -2.13
GAR1P28007 SKI3YPR189W 4299 nt1.74□□□□□ -2.13
GAR1P28007 APL3YBL037W 3078 nt1.74□□□□□ -2.13
GAR1P28007 REV3YPL167C 4515 nt1.74□□□□□ -2.13
GAR1P28007 FAB1YFR019W 6837 nt1.74□□□□□ -2.13
GAR1P28007 UBR2YLR024C 5619 nt1.74□□□□□ -2.13
GAR1P28007 TRM732YMR259C 4263 nt1.74□□□□□ -2.13
GAR1P28007 NEO1YIL048W 3456 nt1.73□□□□□ -2.13
GAR1P28007 SPP41YDR464W 4308 nt1.73□□□□□ -2.13
GAR1P28007 MYO4YAL029C 4416 nt1.72□□□□□ -2.13
Retrieved 100 of 7,029 protein–RNA pairs in 12.1 ms