Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
IFNA1P01562 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
IFNA1P01562 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
IFNA1P01562 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC15.83■□□□□ 0.12
IFNA1P01562 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
IFNA1P01562 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
IFNA1P01562 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
IFNA1P01562 FER1L4-210ENST00000615531 5998 ntBASIC15.83■□□□□ 0.12
IFNA1P01562 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
IFNA1P01562 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
IFNA1P01562 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC15.82■□□□□ 0.12
IFNA1P01562 AL138781.2-201ENST00000617896 1843 ntBASIC15.82■□□□□ 0.12
IFNA1P01562 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
IFNA1P01562 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC15.82■□□□□ 0.12
IFNA1P01562 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
IFNA1P01562 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
IFNA1P01562 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
IFNA1P01562 ADK-206ENST00000541550 2222 ntTSL 2 BASIC15.82■□□□□ 0.12
IFNA1P01562 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC15.82■□□□□ 0.12
IFNA1P01562 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC15.82■□□□□ 0.12
IFNA1P01562 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
IFNA1P01562 BX664725.1-201ENST00000438252 379 ntBASIC15.82■□□□□ 0.12
IFNA1P01562 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC15.82■□□□□ 0.12
IFNA1P01562 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC15.82■□□□□ 0.12
IFNA1P01562 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC15.82■□□□□ 0.12
IFNA1P01562 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC15.82■□□□□ 0.12
IFNA1P01562 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC15.82■□□□□ 0.12
IFNA1P01562 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC15.82■□□□□ 0.12
IFNA1P01562 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC15.82■□□□□ 0.12
IFNA1P01562 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC15.82■□□□□ 0.12
IFNA1P01562 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
IFNA1P01562 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC15.82■□□□□ 0.12
IFNA1P01562 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
IFNA1P01562 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
IFNA1P01562 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
IFNA1P01562 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
IFNA1P01562 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
IFNA1P01562 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
IFNA1P01562 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
IFNA1P01562 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
IFNA1P01562 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
IFNA1P01562 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC15.81■□□□□ 0.12
IFNA1P01562 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
IFNA1P01562 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
IFNA1P01562 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
IFNA1P01562 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
IFNA1P01562 AC055733.4-201ENST00000638462 1354 ntBASIC15.81■□□□□ 0.12
IFNA1P01562 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
IFNA1P01562 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.81■□□□□ 0.12
IFNA1P01562 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC15.81■□□□□ 0.12
IFNA1P01562 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
IFNA1P01562 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
IFNA1P01562 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
IFNA1P01562 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
IFNA1P01562 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
IFNA1P01562 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
IFNA1P01562 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
IFNA1P01562 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
IFNA1P01562 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
IFNA1P01562 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
IFNA1P01562 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
IFNA1P01562 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
IFNA1P01562 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
IFNA1P01562 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
IFNA1P01562 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
IFNA1P01562 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC15.8■□□□□ 0.12
IFNA1P01562 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
IFNA1P01562 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
IFNA1P01562 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
IFNA1P01562 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
IFNA1P01562 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
IFNA1P01562 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
IFNA1P01562 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
IFNA1P01562 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
IFNA1P01562 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
IFNA1P01562 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC15.8■□□□□ 0.12
IFNA1P01562 TREX1-205ENST00000625293 1783 ntBASIC15.8■□□□□ 0.12
IFNA1P01562 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
IFNA1P01562 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
IFNA1P01562 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
IFNA1P01562 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
IFNA1P01562 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
IFNA1P01562 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
IFNA1P01562 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
IFNA1P01562 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
IFNA1P01562 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
IFNA1P01562 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
IFNA1P01562 PTGES2-AS1-201ENST00000443493 2100 ntBASIC15.79■□□□□ 0.12
IFNA1P01562 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
IFNA1P01562 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
IFNA1P01562 LINC01465-201ENST00000408887 1940 ntBASIC15.79■□□□□ 0.12
IFNA1P01562 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
IFNA1P01562 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC15.79■□□□□ 0.12
IFNA1P01562 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
IFNA1P01562 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC15.79■□□□□ 0.12
IFNA1P01562 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
IFNA1P01562 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
IFNA1P01562 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC15.79■□□□□ 0.12
IFNA1P01562 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC15.79■□□□□ 0.12
IFNA1P01562 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms