Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
NKX2-2O95096 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NKX2-2O95096 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.48■□□□□ 0.55
NKX2-2O95096 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NKX2-2O95096 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.48■□□□□ 0.55
NKX2-2O95096 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.48■□□□□ 0.55
NKX2-2O95096 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
NKX2-2O95096 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.48■□□□□ 0.55
NKX2-2O95096 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.48■□□□□ 0.55
NKX2-2O95096 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
NKX2-2O95096 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NKX2-2O95096 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.47■□□□□ 0.55
NKX2-2O95096 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.47■□□□□ 0.55
NKX2-2O95096 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NKX2-2O95096 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
NKX2-2O95096 AC069152.1-201ENST00000438030 544 ntBASIC18.47■□□□□ 0.55
NKX2-2O95096 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.47■□□□□ 0.55
NKX2-2O95096 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.47■□□□□ 0.55
NKX2-2O95096 AC133041.1-202ENST00000642053 222 ntBASIC18.47■□□□□ 0.55
NKX2-2O95096 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
NKX2-2O95096 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NKX2-2O95096 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
NKX2-2O95096 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NKX2-2O95096 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NKX2-2O95096 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.46■□□□□ 0.55
NKX2-2O95096 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
NKX2-2O95096 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
NKX2-2O95096 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NKX2-2O95096 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.46■□□□□ 0.55
NKX2-2O95096 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.46■□□□□ 0.55
NKX2-2O95096 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NKX2-2O95096 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NKX2-2O95096 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
NKX2-2O95096 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.46■□□□□ 0.55
NKX2-2O95096 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NKX2-2O95096 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NKX2-2O95096 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
NKX2-2O95096 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NKX2-2O95096 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NKX2-2O95096 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NKX2-2O95096 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
NKX2-2O95096 AC005829.2-201ENST00000571422 1056 ntBASIC18.46■□□□□ 0.55
NKX2-2O95096 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.46■□□□□ 0.55
NKX2-2O95096 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NKX2-2O95096 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NKX2-2O95096 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
NKX2-2O95096 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NKX2-2O95096 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
NKX2-2O95096 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.46■□□□□ 0.55
NKX2-2O95096 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NKX2-2O95096 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NKX2-2O95096 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
NKX2-2O95096 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.46■□□□□ 0.54
NKX2-2O95096 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NKX2-2O95096 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NKX2-2O95096 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NKX2-2O95096 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
NKX2-2O95096 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.45■□□□□ 0.54
NKX2-2O95096 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NKX2-2O95096 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NKX2-2O95096 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NKX2-2O95096 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NKX2-2O95096 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NKX2-2O95096 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NKX2-2O95096 HLA-L-209ENST00000420110 1011 ntBASIC18.45■□□□□ 0.54
NKX2-2O95096 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.45■□□□□ 0.54
NKX2-2O95096 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.45■□□□□ 0.54
NKX2-2O95096 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.45■□□□□ 0.54
NKX2-2O95096 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
NKX2-2O95096 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.45■□□□□ 0.54
NKX2-2O95096 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NKX2-2O95096 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
NKX2-2O95096 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
NKX2-2O95096 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NKX2-2O95096 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NKX2-2O95096 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NKX2-2O95096 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
NKX2-2O95096 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.45■□□□□ 0.54
NKX2-2O95096 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.45■□□□□ 0.54
NKX2-2O95096 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NKX2-2O95096 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.44■□□□□ 0.54
NKX2-2O95096 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NKX2-2O95096 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NKX2-2O95096 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
NKX2-2O95096 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
NKX2-2O95096 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.44■□□□□ 0.54
NKX2-2O95096 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.44■□□□□ 0.54
NKX2-2O95096 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.44■□□□□ 0.54
NKX2-2O95096 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NKX2-2O95096 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
NKX2-2O95096 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NKX2-2O95096 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.44■□□□□ 0.54
NKX2-2O95096 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NKX2-2O95096 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.44■□□□□ 0.54
NKX2-2O95096 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.44■□□□□ 0.54
NKX2-2O95096 AC083880.1-201ENST00000608266 535 ntBASIC18.44■□□□□ 0.54
NKX2-2O95096 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NKX2-2O95096 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NKX2-2O95096 HLA-B-256ENST00000639848 1089 ntBASIC18.44■□□□□ 0.54
NKX2-2O95096 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms