Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ALX3O95076 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.6■□□□□ 0.41
ALX3O95076 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.6■□□□□ 0.41
ALX3O95076 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ALX3O95076 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
ALX3O95076 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ALX3O95076 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
ALX3O95076 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ALX3O95076 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ALX3O95076 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ALX3O95076 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ALX3O95076 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
ALX3O95076 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
ALX3O95076 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ALX3O95076 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.59■□□□□ 0.41
ALX3O95076 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ALX3O95076 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
ALX3O95076 AK1-201ENST00000223836 736 ntTSL 3 BASIC17.59■□□□□ 0.41
ALX3O95076 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ALX3O95076 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ALX3O95076 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.59■□□□□ 0.41
ALX3O95076 SLC7A5P1-201ENST00000568957 537 ntBASIC17.59■□□□□ 0.41
ALX3O95076 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ALX3O95076 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ALX3O95076 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ALX3O95076 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ALX3O95076 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ALX3O95076 AP000997.3-201ENST00000623333 2250 ntBASIC17.59■□□□□ 0.41
ALX3O95076 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ALX3O95076 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.59■□□□□ 0.41
ALX3O95076 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.41
ALX3O95076 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ALX3O95076 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC17.58■□□□□ 0.41
ALX3O95076 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ALX3O95076 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
ALX3O95076 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.58■□□□□ 0.41
ALX3O95076 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.58■□□□□ 0.41
ALX3O95076 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.58■□□□□ 0.41
ALX3O95076 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ALX3O95076 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.4
ALX3O95076 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ALX3O95076 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC17.58■□□□□ 0.4
ALX3O95076 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ALX3O95076 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
ALX3O95076 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ALX3O95076 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ALX3O95076 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ALX3O95076 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
ALX3O95076 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ALX3O95076 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
ALX3O95076 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.58■□□□□ 0.4
ALX3O95076 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.58■□□□□ 0.4
ALX3O95076 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.58■□□□□ 0.4
ALX3O95076 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
ALX3O95076 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
ALX3O95076 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ALX3O95076 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.58■□□□□ 0.4
ALX3O95076 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ALX3O95076 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
ALX3O95076 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
ALX3O95076 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ALX3O95076 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.57■□□□□ 0.4
ALX3O95076 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ALX3O95076 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.57■□□□□ 0.4
ALX3O95076 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
ALX3O95076 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
ALX3O95076 AC099778.1-201ENST00000568593 1911 ntBASIC17.57■□□□□ 0.4
ALX3O95076 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ALX3O95076 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.57■□□□□ 0.4
ALX3O95076 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ALX3O95076 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ALX3O95076 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ALX3O95076 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.57■□□□□ 0.4
ALX3O95076 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.57■□□□□ 0.4
ALX3O95076 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC17.57■□□□□ 0.4
ALX3O95076 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ALX3O95076 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ALX3O95076 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ALX3O95076 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.57■□□□□ 0.4
ALX3O95076 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
ALX3O95076 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ALX3O95076 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
ALX3O95076 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ALX3O95076 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.56■□□□□ 0.4
ALX3O95076 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
ALX3O95076 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ALX3O95076 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ALX3O95076 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.56■□□□□ 0.4
ALX3O95076 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
ALX3O95076 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.56■□□□□ 0.4
ALX3O95076 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ALX3O95076 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ALX3O95076 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ALX3O95076 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ALX3O95076 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ALX3O95076 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.56■□□□□ 0.4
ALX3O95076 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ALX3O95076 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.56■□□□□ 0.4
ALX3O95076 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.56■□□□□ 0.4
ALX3O95076 AP001160.3-201ENST00000601484 763 ntBASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms