Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
HCN1O60741 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.63■□□□□ 0.57
HCN1O60741 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HCN1O60741 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HCN1O60741 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.63■□□□□ 0.57
HCN1O60741 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
HCN1O60741 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
HCN1O60741 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
HCN1O60741 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.63■□□□□ 0.57
HCN1O60741 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HCN1O60741 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
HCN1O60741 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HCN1O60741 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HCN1O60741 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
HCN1O60741 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HCN1O60741 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
HCN1O60741 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HCN1O60741 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HCN1O60741 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
HCN1O60741 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.62■□□□□ 0.57
HCN1O60741 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.62■□□□□ 0.57
HCN1O60741 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
HCN1O60741 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HCN1O60741 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
HCN1O60741 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HCN1O60741 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
HCN1O60741 AL355472.2-201ENST00000422958 438 ntBASIC18.62■□□□□ 0.57
HCN1O60741 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.62■□□□□ 0.57
HCN1O60741 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.62■□□□□ 0.57
HCN1O60741 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.62■□□□□ 0.57
HCN1O60741 MIR4651-201ENST00000582622 73 ntBASIC18.62■□□□□ 0.57
HCN1O60741 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.62■□□□□ 0.57
HCN1O60741 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.62■□□□□ 0.57
HCN1O60741 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HCN1O60741 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HCN1O60741 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.62■□□□□ 0.57
HCN1O60741 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HCN1O60741 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.62■□□□□ 0.57
HCN1O60741 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
HCN1O60741 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HCN1O60741 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
HCN1O60741 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HCN1O60741 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HCN1O60741 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.62■□□□□ 0.57
HCN1O60741 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HCN1O60741 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HCN1O60741 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HCN1O60741 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HCN1O60741 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.61■□□□□ 0.57
HCN1O60741 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HCN1O60741 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.61■□□□□ 0.57
HCN1O60741 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.61■□□□□ 0.57
HCN1O60741 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HCN1O60741 KRT17P1-201ENST00000399211 1546 ntBASIC18.61■□□□□ 0.57
HCN1O60741 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HCN1O60741 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HCN1O60741 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
HCN1O60741 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.61■□□□□ 0.57
HCN1O60741 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.61■□□□□ 0.57
HCN1O60741 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.61■□□□□ 0.57
HCN1O60741 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
HCN1O60741 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HCN1O60741 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HCN1O60741 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HCN1O60741 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.61■□□□□ 0.57
HCN1O60741 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HCN1O60741 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
HCN1O60741 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HCN1O60741 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
HCN1O60741 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HCN1O60741 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.6■□□□□ 0.57
HCN1O60741 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
HCN1O60741 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.6■□□□□ 0.57
HCN1O60741 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
HCN1O60741 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HCN1O60741 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.6■□□□□ 0.57
HCN1O60741 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.6■□□□□ 0.57
HCN1O60741 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HCN1O60741 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HCN1O60741 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.6■□□□□ 0.57
HCN1O60741 KRT18P68-201ENST00000392293 1000 ntBASIC18.6■□□□□ 0.57
HCN1O60741 POU5F1P3-201ENST00000428824 1078 ntBASIC18.6■□□□□ 0.57
HCN1O60741 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.6■□□□□ 0.57
HCN1O60741 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.6■□□□□ 0.57
HCN1O60741 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.6■□□□□ 0.57
HCN1O60741 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
HCN1O60741 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HCN1O60741 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HCN1O60741 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HCN1O60741 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HCN1O60741 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HCN1O60741 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HCN1O60741 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
HCN1O60741 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.6■□□□□ 0.57
HCN1O60741 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HCN1O60741 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HCN1O60741 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HCN1O60741 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HCN1O60741 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.59■□□□□ 0.57
HCN1O60741 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms