Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.89■□□□□ 0.61
URB1O60287 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
URB1O60287 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
URB1O60287 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
URB1O60287 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
URB1O60287 KRT16P1-201ENST00000399124 1418 ntBASIC18.88■□□□□ 0.61
URB1O60287 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
URB1O60287 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
URB1O60287 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
URB1O60287 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.88■□□□□ 0.61
URB1O60287 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
URB1O60287 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.88■□□□□ 0.61
URB1O60287 AC009947.2-201ENST00000444014 672 ntBASIC18.88■□□□□ 0.61
URB1O60287 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
URB1O60287 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.88■□□□□ 0.61
URB1O60287 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.88■□□□□ 0.61
URB1O60287 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
URB1O60287 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.88■□□□□ 0.61
URB1O60287 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
URB1O60287 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
URB1O60287 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
URB1O60287 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
URB1O60287 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
URB1O60287 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
URB1O60287 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
URB1O60287 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
URB1O60287 FAM8A6P-201ENST00000407496 1135 ntBASIC18.88■□□□□ 0.61
URB1O60287 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.88■□□□□ 0.61
URB1O60287 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.88■□□□□ 0.61
URB1O60287 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.87■□□□□ 0.61
URB1O60287 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
URB1O60287 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.87■□□□□ 0.61
URB1O60287 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
URB1O60287 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
URB1O60287 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
URB1O60287 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
URB1O60287 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
URB1O60287 NIFKP9-201ENST00000419265 221 ntBASIC18.87■□□□□ 0.61
URB1O60287 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.87■□□□□ 0.61
URB1O60287 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.87■□□□□ 0.61
URB1O60287 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
URB1O60287 HTR7P1-202ENST00000624664 4411 ntBASIC18.87■□□□□ 0.61
URB1O60287 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
URB1O60287 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
URB1O60287 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
URB1O60287 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
URB1O60287 BX664615.1-201ENST00000443558 458 ntBASIC18.86■□□□□ 0.61
URB1O60287 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.86■□□□□ 0.61
URB1O60287 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.86■□□□□ 0.61
URB1O60287 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
URB1O60287 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
URB1O60287 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.86■□□□□ 0.61
URB1O60287 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.86■□□□□ 0.61
URB1O60287 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
URB1O60287 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
URB1O60287 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
URB1O60287 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
URB1O60287 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
URB1O60287 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
URB1O60287 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
URB1O60287 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.86■□□□□ 0.61
URB1O60287 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
URB1O60287 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
URB1O60287 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.85■□□□□ 0.61
URB1O60287 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.85■□□□□ 0.61
URB1O60287 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.85■□□□□ 0.61
URB1O60287 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
URB1O60287 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.85■□□□□ 0.61
URB1O60287 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.85■□□□□ 0.61
URB1O60287 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.85■□□□□ 0.61
URB1O60287 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.85■□□□□ 0.61
URB1O60287 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
URB1O60287 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
URB1O60287 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
URB1O60287 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
URB1O60287 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
URB1O60287 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
URB1O60287 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
URB1O60287 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
URB1O60287 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
URB1O60287 AC117947.1-201ENST00000427448 529 ntBASIC18.85■□□□□ 0.61
URB1O60287 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.85■□□□□ 0.61
URB1O60287 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.85■□□□□ 0.61
URB1O60287 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
URB1O60287 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.85■□□□□ 0.61
URB1O60287 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
URB1O60287 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.85■□□□□ 0.61
URB1O60287 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
URB1O60287 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
URB1O60287 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
URB1O60287 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
URB1O60287 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
URB1O60287 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
URB1O60287 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
URB1O60287 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
URB1O60287 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.84■□□□□ 0.61
URB1O60287 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.84■□□□□ 0.61
URB1O60287 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.84■□□□□ 0.61
URB1O60287 AC010203.1-204ENST00000548782 407 ntBASIC18.84■□□□□ 0.61
URB1O60287 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms