Protein–RNA interactions for Protein: O43307

ARHGEF9, Rho guanine nucleotide exchange factor 9, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9O43307 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ARHGEF9O43307 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.44■□□□□ 0.54
ARHGEF9O43307 AC083906.2-201ENST00000511578 360 ntBASIC18.44■□□□□ 0.54
ARHGEF9O43307 SLC7A5P2-201ENST00000553010 536 ntBASIC18.44■□□□□ 0.54
ARHGEF9O43307 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.44■□□□□ 0.54
ARHGEF9O43307 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.44■□□□□ 0.54
ARHGEF9O43307 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
ARHGEF9O43307 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
ARHGEF9O43307 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ARHGEF9O43307 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
ARHGEF9O43307 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ARHGEF9O43307 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ARHGEF9O43307 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ARHGEF9O43307 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ARHGEF9O43307 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.44■□□□□ 0.54
ARHGEF9O43307 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ARHGEF9O43307 AP005212.1-201ENST00000581547 1997 ntBASIC18.44■□□□□ 0.54
ARHGEF9O43307 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ARHGEF9O43307 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ARHGEF9O43307 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
ARHGEF9O43307 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
ARHGEF9O43307 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
ARHGEF9O43307 GABARAPL3-202ENST00000624044 1851 ntBASIC18.43■□□□□ 0.54
ARHGEF9O43307 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ARHGEF9O43307 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ARHGEF9O43307 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ARHGEF9O43307 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
ARHGEF9O43307 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
ARHGEF9O43307 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ARHGEF9O43307 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ARHGEF9O43307 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
ARHGEF9O43307 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
ARHGEF9O43307 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ARHGEF9O43307 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.43■□□□□ 0.54
ARHGEF9O43307 FAM201B-201ENST00000458407 597 ntBASIC18.43■□□□□ 0.54
ARHGEF9O43307 KRT18P6-201ENST00000555540 1265 ntBASIC18.43■□□□□ 0.54
ARHGEF9O43307 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.43■□□□□ 0.54
ARHGEF9O43307 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ARHGEF9O43307 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ARHGEF9O43307 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.43■□□□□ 0.54
ARHGEF9O43307 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ARHGEF9O43307 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
ARHGEF9O43307 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ARHGEF9O43307 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ARHGEF9O43307 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.43■□□□□ 0.54
ARHGEF9O43307 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ARHGEF9O43307 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ARHGEF9O43307 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.42■□□□□ 0.54
ARHGEF9O43307 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ARHGEF9O43307 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
ARHGEF9O43307 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ARHGEF9O43307 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
ARHGEF9O43307 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
ARHGEF9O43307 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ARHGEF9O43307 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ARHGEF9O43307 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
ARHGEF9O43307 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
ARHGEF9O43307 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ARHGEF9O43307 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.42■□□□□ 0.54
ARHGEF9O43307 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ARHGEF9O43307 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ARHGEF9O43307 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.42■□□□□ 0.54
ARHGEF9O43307 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ARHGEF9O43307 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.42■□□□□ 0.54
ARHGEF9O43307 AC007322.1-201ENST00000426983 750 ntBASIC18.42■□□□□ 0.54
ARHGEF9O43307 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.42■□□□□ 0.54
ARHGEF9O43307 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
ARHGEF9O43307 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
ARHGEF9O43307 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ARHGEF9O43307 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ARHGEF9O43307 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ARHGEF9O43307 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ARHGEF9O43307 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.42■□□□□ 0.54
ARHGEF9O43307 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ARHGEF9O43307 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ARHGEF9O43307 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.42■□□□□ 0.54
ARHGEF9O43307 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ARHGEF9O43307 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.41■□□□□ 0.54
ARHGEF9O43307 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
ARHGEF9O43307 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
ARHGEF9O43307 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.41■□□□□ 0.54
ARHGEF9O43307 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.41■□□□□ 0.54
ARHGEF9O43307 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ARHGEF9O43307 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ARHGEF9O43307 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ARHGEF9O43307 AC027702.1-201ENST00000563810 1770 ntBASIC18.41■□□□□ 0.54
ARHGEF9O43307 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
ARHGEF9O43307 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ARHGEF9O43307 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.41■□□□□ 0.54
ARHGEF9O43307 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.41■□□□□ 0.54
ARHGEF9O43307 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ARHGEF9O43307 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ARHGEF9O43307 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.41■□□□□ 0.54
ARHGEF9O43307 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.41■□□□□ 0.54
ARHGEF9O43307 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ARHGEF9O43307 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.41■□□□□ 0.54
ARHGEF9O43307 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
ARHGEF9O43307 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
ARHGEF9O43307 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ARHGEF9O43307 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms