Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH17O14917 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH17O14917 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH17O14917 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH17O14917 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH17O14917 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.06■□□□□ 0.64
PCDH17O14917 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH17O14917 AP003097.1-201ENST00000530657 1135 ntBASIC19.06■□□□□ 0.64
PCDH17O14917 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.06■□□□□ 0.64
PCDH17O14917 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PCDH17O14917 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH17O14917 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDH17O14917 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH17O14917 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH17O14917 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PCDH17O14917 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH17O14917 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH17O14917 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.06■□□□□ 0.64
PCDH17O14917 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH17O14917 AL512408.1-201ENST00000569378 2000 ntBASIC19.05■□□□□ 0.64
PCDH17O14917 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH17O14917 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH17O14917 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.05■□□□□ 0.64
PCDH17O14917 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH17O14917 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.05■□□□□ 0.64
PCDH17O14917 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH17O14917 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.05■□□□□ 0.64
PCDH17O14917 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.05■□□□□ 0.64
PCDH17O14917 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH17O14917 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
PCDH17O14917 PNMA6B-201ENST00000538162 1200 ntBASIC19.05■□□□□ 0.64
PCDH17O14917 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
PCDH17O14917 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.05■□□□□ 0.64
PCDH17O14917 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDH17O14917 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.05■□□□□ 0.64
PCDH17O14917 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDH17O14917 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.05■□□□□ 0.64
PCDH17O14917 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.05■□□□□ 0.64
PCDH17O14917 AC092368.3-202ENST00000574180 1591 ntBASIC19.05■□□□□ 0.64
PCDH17O14917 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH17O14917 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH17O14917 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDH17O14917 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH17O14917 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH17O14917 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
PCDH17O14917 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH17O14917 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH17O14917 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.04■□□□□ 0.64
PCDH17O14917 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
PCDH17O14917 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
PCDH17O14917 AC007952.6-201ENST00000573168 2673 ntBASIC19.04■□□□□ 0.64
PCDH17O14917 AC003957.1-201ENST00000625108 2673 ntBASIC19.04■□□□□ 0.64
PCDH17O14917 PRORSD1P-201ENST00000295112 541 ntBASIC19.04■□□□□ 0.64
PCDH17O14917 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH17O14917 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PCDH17O14917 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH17O14917 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDH17O14917 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH17O14917 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
PCDH17O14917 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH17O14917 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
PCDH17O14917 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
PCDH17O14917 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PCDH17O14917 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH17O14917 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH17O14917 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH17O14917 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.04■□□□□ 0.64
PCDH17O14917 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PCDH17O14917 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.04■□□□□ 0.64
PCDH17O14917 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH17O14917 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH17O14917 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH17O14917 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH17O14917 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH17O14917 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH17O14917 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH17O14917 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH17O14917 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
PCDH17O14917 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH17O14917 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH17O14917 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH17O14917 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH17O14917 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH17O14917 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
PCDH17O14917 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDH17O14917 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH17O14917 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH17O14917 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDH17O14917 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH17O14917 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.03■□□□□ 0.64
PCDH17O14917 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDH17O14917 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.03■□□□□ 0.64
PCDH17O14917 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH17O14917 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
PCDH17O14917 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH17O14917 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH17O14917 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH17O14917 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDH17O14917 AL162377.1-201ENST00000618844 1793 ntBASIC19.03■□□□□ 0.64
PCDH17O14917 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms