Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.62■□□□□ 0.25
RNF223E7ERA6 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RNF223E7ERA6 RN7SL275P-201ENST00000582762 335 ntBASIC16.62■□□□□ 0.25
RNF223E7ERA6 MIR2861-201ENST00000636310 90 ntBASIC16.62■□□□□ 0.25
RNF223E7ERA6 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
RNF223E7ERA6 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF223E7ERA6 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF223E7ERA6 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
RNF223E7ERA6 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC16.62■□□□□ 0.25
RNF223E7ERA6 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF223E7ERA6 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF223E7ERA6 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF223E7ERA6 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF223E7ERA6 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF223E7ERA6 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
RNF223E7ERA6 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
RNF223E7ERA6 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF223E7ERA6 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.61■□□□□ 0.25
RNF223E7ERA6 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF223E7ERA6 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
RNF223E7ERA6 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF223E7ERA6 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNF223E7ERA6 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF223E7ERA6 GUSBP5-202ENST00000510805 1989 ntBASIC16.61■□□□□ 0.25
RNF223E7ERA6 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF223E7ERA6 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.61■□□□□ 0.25
RNF223E7ERA6 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF223E7ERA6 NIFKP9-201ENST00000419265 221 ntBASIC16.61■□□□□ 0.25
RNF223E7ERA6 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.61■□□□□ 0.25
RNF223E7ERA6 AC116562.2-201ENST00000507042 360 ntBASIC16.61■□□□□ 0.25
RNF223E7ERA6 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNF223E7ERA6 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF223E7ERA6 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF223E7ERA6 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNF223E7ERA6 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.61■□□□□ 0.25
RNF223E7ERA6 NTF6B-201ENST00000591913 560 ntBASIC16.61■□□□□ 0.25
RNF223E7ERA6 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF223E7ERA6 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF223E7ERA6 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RNF223E7ERA6 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF223E7ERA6 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF223E7ERA6 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNF223E7ERA6 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF223E7ERA6 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF223E7ERA6 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC16.61■□□□□ 0.25
RNF223E7ERA6 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF223E7ERA6 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNF223E7ERA6 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF223E7ERA6 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.6■□□□□ 0.25
RNF223E7ERA6 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC16.6■□□□□ 0.25
RNF223E7ERA6 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF223E7ERA6 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF223E7ERA6 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
RNF223E7ERA6 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF223E7ERA6 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF223E7ERA6 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF223E7ERA6 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF223E7ERA6 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF223E7ERA6 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC16.6■□□□□ 0.25
RNF223E7ERA6 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC16.6■□□□□ 0.25
RNF223E7ERA6 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF223E7ERA6 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF223E7ERA6 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF223E7ERA6 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF223E7ERA6 MTND2P7-201ENST00000521337 640 ntBASIC16.6■□□□□ 0.25
RNF223E7ERA6 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF223E7ERA6 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RNF223E7ERA6 AC087388.1-201ENST00000571370 1112 ntBASIC16.6■□□□□ 0.25
RNF223E7ERA6 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF223E7ERA6 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF223E7ERA6 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
RNF223E7ERA6 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF223E7ERA6 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF223E7ERA6 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.6■□□□□ 0.25
RNF223E7ERA6 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF223E7ERA6 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
RNF223E7ERA6 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF223E7ERA6 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RNF223E7ERA6 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC16.59■□□□□ 0.25
RNF223E7ERA6 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF223E7ERA6 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF223E7ERA6 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
RNF223E7ERA6 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.59■□□□□ 0.25
RNF223E7ERA6 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF223E7ERA6 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF223E7ERA6 DUX4L26-201ENST00000489078 1255 ntBASIC16.59■□□□□ 0.25
RNF223E7ERA6 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.59■□□□□ 0.25
RNF223E7ERA6 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.59■□□□□ 0.25
RNF223E7ERA6 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.59■□□□□ 0.25
RNF223E7ERA6 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.59■□□□□ 0.25
RNF223E7ERA6 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
RNF223E7ERA6 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF223E7ERA6 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF223E7ERA6 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF223E7ERA6 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF223E7ERA6 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
RNF223E7ERA6 PARN-205ENST00000539279 1557 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF223E7ERA6 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC16.59■□□□□ 0.25
RNF223E7ERA6 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RNF223E7ERA6 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms