Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 OLFM5P-201ENST00000411807 1478 ntBASIC5.37□□□□□ -1.55
AP1S3Q96PC3 CAMK2D-213ENST00000514328 1497 ntTSL 5 BASIC5.37□□□□□ -1.55
AP1S3Q96PC3 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
AP1S3Q96PC3 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
AP1S3Q96PC3 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
AP1S3Q96PC3 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC5.37□□□□□ -1.55
AP1S3Q96PC3 AC016722.2-201ENST00000429761 1835 ntTSL 2 BASIC5.37□□□□□ -1.55
AP1S3Q96PC3 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.36□□□□□ -1.55
AP1S3Q96PC3 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC5.36□□□□□ -1.55
AP1S3Q96PC3 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.36□□□□□ -1.55
AP1S3Q96PC3 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
AP1S3Q96PC3 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
AP1S3Q96PC3 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
AP1S3Q96PC3 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
AP1S3Q96PC3 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.36□□□□□ -1.55
AP1S3Q96PC3 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC5.36□□□□□ -1.55
AP1S3Q96PC3 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
AP1S3Q96PC3 OR11H13P-201ENST00000359695 979 ntBASIC5.36□□□□□ -1.55
AP1S3Q96PC3 LEMD1-202ENST00000367151 869 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
AP1S3Q96PC3 LEMD1-204ENST00000367153 929 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
AP1S3Q96PC3 TSACC-202ENST00000368252 491 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
AP1S3Q96PC3 PAGE5-203ENST00000374955 540 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
AP1S3Q96PC3 LEMD1-206ENST00000391936 727 ntTSL 5 BASIC5.36□□□□□ -1.55
AP1S3Q96PC3 AC074254.1-201ENST00000399152 404 ntTSL 5 BASIC5.36□□□□□ -1.55
AP1S3Q96PC3 AC008770.1-201ENST00000406892 1257 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
AP1S3Q96PC3 U3.31-201ENST00000408113 216 ntBASIC5.36□□□□□ -1.55
AP1S3Q96PC3 RNU4ATAC2P-201ENST00000408674 126 ntBASIC5.36□□□□□ -1.55
AP1S3Q96PC3 OCM-202ENST00000416608 623 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
AP1S3Q96PC3 NME1P1-201ENST00000420914 382 ntBASIC5.36□□□□□ -1.55
AP1S3Q96PC3 LINC00665-202ENST00000427868 690 ntTSL 3 BASIC5.36□□□□□ -1.55
AP1S3Q96PC3 CCNT2-AS1-203ENST00000428857 677 ntTSL 4 BASIC5.36□□□□□ -1.55
AP1S3Q96PC3 BMP6P1-201ENST00000431230 679 ntBASIC5.36□□□□□ -1.55
AP1S3Q96PC3 AC092447.7-202ENST00000443198 580 ntTSL 2 BASIC5.36□□□□□ -1.55
AP1S3Q96PC3 SS18L2P1-201ENST00000445923 213 ntBASIC5.36□□□□□ -1.55
AP1S3Q96PC3 CT45A11P-201ENST00000448043 1134 ntBASIC5.36□□□□□ -1.55
AP1S3Q96PC3 AC093157.1-205ENST00000449473 1298 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
AP1S3Q96PC3 PRKG1-AS1-203ENST00000452247 886 ntTSL 5 BASIC5.36□□□□□ -1.55
AP1S3Q96PC3 AL592043.2-201ENST00000454146 743 ntBASIC5.36□□□□□ -1.55
AP1S3Q96PC3 AC040975.1-201ENST00000472104 316 ntBASIC5.36□□□□□ -1.55
AP1S3Q96PC3 RN7SL792P-201ENST00000496286 305 ntBASIC5.36□□□□□ -1.55
AP1S3Q96PC3 AC093821.1-201ENST00000503950 539 ntTSL 4 BASIC5.36□□□□□ -1.55
AP1S3Q96PC3 AC233724.10-201ENST00000510454 409 ntBASIC5.36□□□□□ -1.55
AP1S3Q96PC3 RPL10P18-201ENST00000519384 309 ntBASIC5.36□□□□□ -1.55
AP1S3Q96PC3 OSTCP1-202ENST00000522287 1195 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
AP1S3Q96PC3 AP000880.1-202ENST00000526487 588 ntTSL 3 BASIC5.36□□□□□ -1.55
AP1S3Q96PC3 HTATIP2-206ENST00000531058 1060 ntTSL 3 BASIC5.36□□□□□ -1.55
AP1S3Q96PC3 AC011611.6-201ENST00000547483 255 ntBASIC5.36□□□□□ -1.55
AP1S3Q96PC3 CD63-206ENST00000548160 648 ntTSL 2 BASIC5.36□□□□□ -1.55
AP1S3Q96PC3 AC024270.1-201ENST00000559181 404 ntBASIC5.36□□□□□ -1.55
AP1S3Q96PC3 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC5.36□□□□□ -1.55
AP1S3Q96PC3 SOD1P2-201ENST00000563903 451 ntBASIC5.36□□□□□ -1.55
AP1S3Q96PC3 AC105430.1-202ENST00000567477 483 ntTSL 3 BASIC5.36□□□□□ -1.55
AP1S3Q96PC3 AC008870.2-201ENST00000568262 1024 ntBASIC5.36□□□□□ -1.55
AP1S3Q96PC3 AC067852.5-201ENST00000589299 310 ntBASIC5.36□□□□□ -1.55
AP1S3Q96PC3 Z98949.1-208ENST00000597614 816 ntTSL 5 BASIC5.36□□□□□ -1.55
AP1S3Q96PC3 BX649601.1-201ENST00000608264 572 ntBASIC5.36□□□□□ -1.55
AP1S3Q96PC3 5S_rRNA.20-201ENST00000612104 118 ntBASIC5.36□□□□□ -1.55
AP1S3Q96PC3 AC080112.3-201ENST00000612552 880 ntBASIC5.36□□□□□ -1.55
AP1S3Q96PC3 AC143336.1-201ENST00000614164 836 ntBASIC5.36□□□□□ -1.55
AP1S3Q96PC3 AC012254.5-201ENST00000623573 478 ntBASIC5.36□□□□□ -1.55
AP1S3Q96PC3 AP005242.3-201ENST00000623604 607 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
AP1S3Q96PC3 CASC22-202ENST00000628396 802 ntTSL 5 BASIC5.36□□□□□ -1.55
AP1S3Q96PC3 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
AP1S3Q96PC3 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC5.36□□□□□ -1.55
AP1S3Q96PC3 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
AP1S3Q96PC3 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
AP1S3Q96PC3 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.36□□□□□ -1.55
AP1S3Q96PC3 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
AP1S3Q96PC3 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
AP1S3Q96PC3 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
AP1S3Q96PC3 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
AP1S3Q96PC3 MTA3-201ENST00000405094 1785 ntTSL 5 BASIC5.36□□□□□ -1.55
AP1S3Q96PC3 CYP19A1-216ENST00000559878 1958 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
AP1S3Q96PC3 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
AP1S3Q96PC3 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
AP1S3Q96PC3 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC5.36□□□□□ -1.55
AP1S3Q96PC3 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC5.36□□□□□ -1.55
AP1S3Q96PC3 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
AP1S3Q96PC3 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.36□□□□□ -1.55
AP1S3Q96PC3 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
AP1S3Q96PC3 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
AP1S3Q96PC3 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
AP1S3Q96PC3 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
AP1S3Q96PC3 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.35□□□□□ -1.55
AP1S3Q96PC3 CUL4B-201ENST00000336592 3109 ntTSL 5 BASIC5.35□□□□□ -1.55
AP1S3Q96PC3 AC005618.1-201ENST00000606901 3148 ntBASIC5.35□□□□□ -1.55
AP1S3Q96PC3 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
AP1S3Q96PC3 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
AP1S3Q96PC3 AC027313.1-201ENST00000509159 1666 ntBASIC5.35□□□□□ -1.55
AP1S3Q96PC3 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
AP1S3Q96PC3 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC5.35□□□□□ -1.55
AP1S3Q96PC3 FAM122C-202ENST00000370785 1344 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
AP1S3Q96PC3 OCM-201ENST00000242104 695 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
AP1S3Q96PC3 TAAR8-201ENST00000275200 1029 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
AP1S3Q96PC3 TMCO5A-201ENST00000319669 1274 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
AP1S3Q96PC3 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
AP1S3Q96PC3 RNA5SP218-201ENST00000363188 109 ntBASIC5.35□□□□□ -1.55
AP1S3Q96PC3 COQ3-202ENST00000369240 646 ntTSL 5 BASIC5.35□□□□□ -1.55
AP1S3Q96PC3 PHBP1-201ENST00000392260 808 ntBASIC5.35□□□□□ -1.55
AP1S3Q96PC3 NUS1P4-201ENST00000401550 585 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms