RNA–Protein interactions for RNA: ENST00000378588.4

CYBB-201, Transcript of cytochrome b-245 beta chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYBB, Length 4,324 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYBB-201ENST00000378588 NISCHQ9Y2I1 1504 aa11.17□□□□□ -0.62
CYBB-201ENST00000378588 DCAF8L2P0C7V8 631 aa10.66□□□□□ -0.7
CYBB-201ENST00000378588 SUPT5HO00267 1087 aaKnown RBP10.42□□□□□ -0.74
CYBB-201ENST00000378588 SHROOM4Q9ULL8 1493 aa10.32□□□□□ -0.76
CYBB-201ENST00000378588 PCGF6Q9BYE7 350 aa9.82□□□□□ -0.84
CYBB-201ENST00000378588 EHMT2Q96KQ7 1210 aa9.8□□□□□ -0.84
CYBB-201ENST00000378588 FAM9AQ8IZU1 332 aaPredicted RBP9.74□□□□□ -0.85
CYBB-201ENST00000378588 TRIM41Q8WV44 630 aa9.69□□□□□ -0.86
CYBB-201ENST00000378588 CHIC1Q5VXU3 224 aa9.64□□□□□ -0.87
CYBB-201ENST00000378588 ZEB1P37275 1124 aaPredicted RBP9.61□□□□□ -0.87
CYBB-201ENST00000378588 APLP2Q06481 763 aa9.58□□□□□ -0.88
CYBB-201ENST00000378588 HRCP23327 699 aa9.54□□□□□ -0.88
CYBB-201ENST00000378588 TRIM26Q12899 539 aaPredicted RBP9.51□□□□□ -0.89
CYBB-201ENST00000378588 LOC105371045A0A1W2PR82 267 aa9.5□□□□□ -0.89
CYBB-201ENST00000378588 TTBK1Q5TCY1 1321 aaPredicted RBP9.49□□□□□ -0.89
CYBB-201ENST00000378588 CCER1Q8TC90 406 aaPredicted RBP9.47□□□□□ -0.89
CYBB-201ENST00000378588 UBTFP17480 764 aaKnown RBP9.43□□□□□ -0.9
CYBB-201ENST00000378588 CCDC180Q9P1Z9 1646 aa9.39□□□□□ -0.91
CYBB-201ENST00000378588 PELP1Q8IZL8 1130 aaKnown RBP9.38□□□□□ -0.91
CYBB-201ENST00000378588 CENPBP07199 599 aaPredicted RBP9.38□□□□□ -0.91
CYBB-201ENST00000378588 PPARGC1BQ86YN6 1023 aaKnown RBP9.36□□□□□ -0.91
CYBB-201ENST00000378588 RANGAP1P46060 587 aaPredicted RBP9.35□□□□□ -0.91
CYBB-201ENST00000378588 ZCCHC6Q5VYS8 1495 aaKnown RBP9.31□□□□□ -0.92
CYBB-201ENST00000378588 ABCC9O60706 1549 aa9.2□□□□□ -0.94
CYBB-201ENST00000378588 ATP1B4Q9UN42 357 aaPredicted RBP9.19□□□□□ -0.94
CYBB-201ENST00000378588 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.15□□□□□ -0.94
CYBB-201ENST00000378588 YTHDC1Q96MU7 727 aaKnown RBP9.15□□□□□ -0.94
CYBB-201ENST00000378588 HNRNPUL2Q1KMD3 747 aaKnown RBP9.14□□□□□ -0.95
CYBB-201ENST00000378588 DCAF1Q9Y4B6 1507 aa9.09□□□□□ -0.95
CYBB-201ENST00000378588 PABPN1Q86U42 306 aaKnown RBP eCLIP9.08□□□□□ -0.96
CYBB-201ENST00000378588 DIEXFQ68CQ4 756 aaKnown RBP9.08□□□□□ -0.96
CYBB-201ENST00000378588 ITGAEP38570 1179 aa9.05□□□□□ -0.96
CYBB-201ENST00000378588 CSRNP3Q8WYN3 585 aa9.03□□□□□ -0.96
CYBB-201ENST00000378588 NEFLP07196 543 aa9.02□□□□□ -0.97
CYBB-201ENST00000378588 SCRIBQ14160 1630 aa9.01□□□□□ -0.97
CYBB-201ENST00000378588 MYO15BQ96JP2 1530 aa9.01□□□□□ -0.97
CYBB-201ENST00000378588 MYT1Q01538 1121 aa8.99□□□□□ -0.97
CYBB-201ENST00000378588 RSF1Q96T23 1441 aaPredicted RBP8.96□□□□□ -0.97
CYBB-201ENST00000378588 ZNF316A6NFI3 1004 aaPredicted RBP8.93□□□□□ -0.98
CYBB-201ENST00000378588 ERICH6Q7L0X2 663 aa8.92□□□□□ -0.98
CYBB-201ENST00000378588 GTF3C3Q9Y5Q9 886 aa8.89□□□□□ -0.99
CYBB-201ENST00000378588 FAM50AQ14320 339 aaKnown RBP8.88□□□□□ -0.99
CYBB-201ENST00000378588 ACIN1Q9UKV3 1341 aaKnown RBP8.87□□□□□ -0.99
CYBB-201ENST00000378588 NEUROD1Q13562 356 aa8.81□□□□□ -1
CYBB-201ENST00000378588 NACADO15069 1562 aa8.81□□□□□ -1
CYBB-201ENST00000378588 EEA1Q15075 1411 aa8.78□□□□□ -1
CYBB-201ENST00000378588 RB1CC1Q8TDY2 1594 aa8.78□□□□□ -1
CYBB-201ENST00000378588 POLR3GLQ9BT43 218 aa8.77□□□□□ -1.01
CYBB-201ENST00000378588 TRIM52Q96A61 297 aa8.75□□□□□ -1.01
CYBB-201ENST00000378588 CECR2Q9BXF3 1484 aa8.75□□□□□ -1.01
CYBB-201ENST00000378588 P3H3Q8IVL6 736 aa8.74□□□□□ -1.01
CYBB-201ENST00000378588 CEP162Q5TB80 1403 aa8.74□□□□□ -1.01
CYBB-201ENST00000378588 ANP32CO43423 234 aa8.74□□□□□ -1.01
CYBB-201ENST00000378588 CLIP1P30622 1438 aa8.73□□□□□ -1.01
CYBB-201ENST00000378588 TNIKQ9UKE5 1360 aa8.73□□□□□ -1.01
CYBB-201ENST00000378588 GOLGA3Q08378 1498 aa8.7□□□□□ -1.02
CYBB-201ENST00000378588 CNGB1Q14028 1251 aaPredicted RBP8.7□□□□□ -1.02
CYBB-201ENST00000378588 WRNQ14191 1432 aaPredicted RBP eCLIP8.7□□□□□ -1.02
CYBB-201ENST00000378588 BAZ1AQ9NRL2 1556 aaPredicted RBP8.7□□□□□ -1.02
CYBB-201ENST00000378588 SCAF1Q9H7N4 1312 aaKnown RBP8.69□□□□□ -1.02
CYBB-201ENST00000378588 CLSPNQ9HAW4 1339 aa8.66□□□□□ -1.02
CYBB-201ENST00000378588 BCANQ96GW7 911 aa8.66□□□□□ -1.02
CYBB-201ENST00000378588 MROH2BQ7Z745 1585 aa8.65□□□□□ -1.02
CYBB-201ENST00000378588 MIER1Q8N108 512 aa8.65□□□□□ -1.02
CYBB-201ENST00000378588 MYT1LQ9UL68 1186 aa8.64□□□□□ -1.03
CYBB-201ENST00000378588 CEP164Q9UPV0 1460 aa8.64□□□□□ -1.03
CYBB-201ENST00000378588 SOGA1O94964 1423 aa8.61□□□□□ -1.03
CYBB-201ENST00000378588 DDX10Q13206 875 aaKnown RBP8.61□□□□□ -1.03
CYBB-201ENST00000378588 TONSLQ96HA7 1378 aa8.61□□□□□ -1.03
CYBB-201ENST00000378588 BAZ1BQ9UIG0 1483 aaKnown RBP8.61□□□□□ -1.03
CYBB-201ENST00000378588 ZNF326Q5BKZ1 582 aaKnown RBP8.6□□□□□ -1.03
CYBB-201ENST00000378588 CDK11AQ9UQ88 783 aaPredicted RBP8.59□□□□□ -1.03
CYBB-201ENST00000378588 ARID3CA6NKF2 412 aa8.58□□□□□ -1.04
CYBB-201ENST00000378588 DAXXQ9UER7 740 aaPredicted RBP8.58□□□□□ -1.04
CYBB-201ENST00000378588 CCDC88BA6NC98 1476 aa8.58□□□□□ -1.04
CYBB-201ENST00000378588 FBLN2P98095 1184 aa8.58□□□□□ -1.04
CYBB-201ENST00000378588 KIF27Q86VH2 1401 aa8.57□□□□□ -1.04
CYBB-201ENST00000378588 FKBP8Q14318 412 aa8.55□□□□□ -1.04
CYBB-201ENST00000378588 MTUS2Q5JR59 1369 aa8.54□□□□□ -1.04
CYBB-201ENST00000378588 ZNF777Q9ULD5 760 aaPredicted RBP8.52□□□□□ -1.05
CYBB-201ENST00000378588 ABCC8Q09428 1581 aa8.52□□□□□ -1.05
CYBB-201ENST00000378588 CHIC2Q9UKJ5 165 aa8.52□□□□□ -1.05
CYBB-201ENST00000378588 HNRNPUQ00839 825 aaKnown RBP eCLIP8.51□□□□□ -1.05
CYBB-201ENST00000378588 VPS8Q8N3P4 1428 aa8.51□□□□□ -1.05
CYBB-201ENST00000378588 WIZO95785 1651 aa8.5□□□□□ -1.05
CYBB-201ENST00000378588 RTL5Q5HYW3 569 aaPredicted RBP8.5□□□□□ -1.05
CYBB-201ENST00000378588 TOP2AP11388 1531 aaKnown RBP8.49□□□□□ -1.05
CYBB-201ENST00000378588 UNC13AQ9UPW8 1703 aa8.49□□□□□ -1.05
CYBB-201ENST00000378588 HIRIP3Q9BW71 556 aaPredicted RBP8.48□□□□□ -1.05
CYBB-201ENST00000378588 SLC4A1APQ9BWU0 796 aaKnown RBP8.48□□□□□ -1.05
CYBB-201ENST00000378588 CCNB3Q8WWL7 1395 aa8.48□□□□□ -1.05
CYBB-201ENST00000378588 FAM9BQ8IZU0 186 aa8.45□□□□□ -1.06
CYBB-201ENST00000378588 EIF4G2P78344 907 aaKnown RBP eCLIP8.45□□□□□ -1.06
CYBB-201ENST00000378588 RRP7BPQ9NSQ0 103 aa8.45□□□□□ -1.06
CYBB-201ENST00000378588 CARMIL1Q5VZK9 1371 aa8.44□□□□□ -1.06
CYBB-201ENST00000378588 KANK4Q5T7N3 995 aaPredicted RBP8.44□□□□□ -1.06
CYBB-201ENST00000378588 SIN3AQ96ST3 1273 aa8.43□□□□□ -1.06
CYBB-201ENST00000378588 TIMELESSQ9UNS1 1208 aa8.43□□□□□ -1.06
CYBB-201ENST00000378588 FHAD1B1AJZ9 1412 aa8.43□□□□□ -1.06
CYBB-201ENST00000378588 SMARCA2P51531 1590 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms