Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 TNIK-211ENST00000475336 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
CPS1P31327 AC018688.1-201ENST00000636528 1754 ntBASIC9.91□□□□□ -0.82
CPS1P31327 KIAA1671-202ENST00000401395 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
CPS1P31327 IYD-201ENST00000229447 7513 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
CPS1P31327 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
CPS1P31327 NFRKB-202ENST00000524746 4114 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
CPS1P31327 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
CPS1P31327 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC9.91□□□□□ -0.82
CPS1P31327 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC9.91□□□□□ -0.82
CPS1P31327 Z93019.1-201ENST00000416450 973 ntBASIC9.91□□□□□ -0.82
CPS1P31327 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
CPS1P31327 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC9.91□□□□□ -0.82
CPS1P31327 RPS4XP14-201ENST00000493072 781 ntBASIC9.91□□□□□ -0.82
CPS1P31327 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC9.91□□□□□ -0.82
CPS1P31327 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC9.91□□□□□ -0.82
CPS1P31327 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC9.91□□□□□ -0.82
CPS1P31327 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC9.91□□□□□ -0.82
CPS1P31327 AC002519.2-203ENST00000567043 837 ntBASIC9.91□□□□□ -0.82
CPS1P31327 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC9.91□□□□□ -0.82
CPS1P31327 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
CPS1P31327 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC9.91□□□□□ -0.82
CPS1P31327 AC008521.2-201ENST00000591021 259 ntBASIC9.91□□□□□ -0.82
CPS1P31327 AC104184.1-201ENST00000607513 721 ntBASIC9.91□□□□□ -0.82
CPS1P31327 AL135999.3-201ENST00000610501 812 ntBASIC9.91□□□□□ -0.82
CPS1P31327 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC9.91□□□□□ -0.82
CPS1P31327 AL133320.1-201ENST00000621423 2352 ntBASIC9.91□□□□□ -0.82
CPS1P31327 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
CPS1P31327 PRICKLE2-204ENST00000564377 8032 ntAPPRIS P2 TSL 5 BASIC9.91□□□□□ -0.82
CPS1P31327 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC9.9□□□□□ -0.82
CPS1P31327 COL12A1-201ENST00000322507 11723 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
CPS1P31327 ZNF568-215ENST00000617745 2441 ntTSL 5 BASIC9.9□□□□□ -0.82
CPS1P31327 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC9.9□□□□□ -0.82
CPS1P31327 INTS7-202ENST00000366993 3422 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
CPS1P31327 HNRNPA2B1-201ENST00000354667 3664 ntAPPRIS ALT1 TSL 1 (best) BASIC9.9□□□□□ -0.82
CPS1P31327 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
CPS1P31327 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
CPS1P31327 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC9.9□□□□□ -0.82
CPS1P31327 NKRF-201ENST00000304449 3269 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
CPS1P31327 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC9.9□□□□□ -0.82
CPS1P31327 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC9.9□□□□□ -0.82
CPS1P31327 OR7A2P-201ENST00000304105 930 ntBASIC9.9□□□□□ -0.82
CPS1P31327 AL359715.1-201ENST00000404330 555 ntBASIC9.9□□□□□ -0.82
CPS1P31327 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC9.9□□□□□ -0.82
CPS1P31327 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
CPS1P31327 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC9.9□□□□□ -0.82
CPS1P31327 COL11A2P1-205ENST00000441798 676 ntBASIC9.9□□□□□ -0.82
CPS1P31327 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
CPS1P31327 AC006539.1-201ENST00000481419 501 ntBASIC9.9□□□□□ -0.82
CPS1P31327 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC9.9□□□□□ -0.82
CPS1P31327 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC9.9□□□□□ -0.82
CPS1P31327 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC9.9□□□□□ -0.82
CPS1P31327 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC9.9□□□□□ -0.82
CPS1P31327 5S_rRNA.23-201ENST00000612086 102 ntBASIC9.9□□□□□ -0.82
CPS1P31327 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC9.9□□□□□ -0.82
CPS1P31327 LUCAT1-203ENST00000513626 2672 ntTSL 2 BASIC9.9□□□□□ -0.82
CPS1P31327 LINC02209-201ENST00000521245 2651 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
CPS1P31327 STOM-201ENST00000286713 3010 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
CPS1P31327 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
CPS1P31327 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
CPS1P31327 AC007406.5-201ENST00000570140 3170 ntBASIC9.9□□□□□ -0.82
CPS1P31327 RABEP1-201ENST00000341923 2490 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
CPS1P31327 CELF2-204ENST00000417956 8044 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.83
CPS1P31327 AC061975.5-201ENST00000584928 1441 ntBASIC9.9□□□□□ -0.83
CPS1P31327 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC9.9□□□□□ -0.83
CPS1P31327 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC9.9□□□□□ -0.83
CPS1P31327 CRNKL1-202ENST00000377340 4406 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
CPS1P31327 DROSHA-220ENST00000513349 4681 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
CPS1P31327 HERC3-202ENST00000402738 4974 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
CPS1P31327 ATP9A-201ENST00000311637 7437 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
CPS1P31327 NANOG-201ENST00000229307 5183 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
CPS1P31327 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC9.89□□□□□ -0.83
CPS1P31327 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC9.89□□□□□ -0.83
CPS1P31327 PPHLN1-202ENST00000317560 1359 ntTSL 2 BASIC9.89□□□□□ -0.83
CPS1P31327 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC9.89□□□□□ -0.83
CPS1P31327 ANKS1B-211ENST00000547776 3885 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
CPS1P31327 ZNF217-202ENST00000371471 5796 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
CPS1P31327 NMD3-201ENST00000351193 3049 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
CPS1P31327 GPR156-201ENST00000315843 4193 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
CPS1P31327 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
CPS1P31327 SNORA68-201ENST00000384437 133 ntBASIC9.89□□□□□ -0.83
CPS1P31327 HMGN1P20-201ENST00000411849 300 ntBASIC9.89□□□□□ -0.83
CPS1P31327 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC9.89□□□□□ -0.83
CPS1P31327 AC079355.1-201ENST00000421770 223 ntBASIC9.89□□□□□ -0.83
CPS1P31327 IPPKP1-201ENST00000422501 768 ntBASIC9.89□□□□□ -0.83
CPS1P31327 AL645939.3-201ENST00000435408 225 ntBASIC9.89□□□□□ -0.83
CPS1P31327 AC110749.1-201ENST00000462007 357 ntBASIC9.89□□□□□ -0.83
CPS1P31327 RN7SL654P-201ENST00000479178 292 ntBASIC9.89□□□□□ -0.83
CPS1P31327 AP005202.1-201ENST00000489915 867 ntBASIC9.89□□□□□ -0.83
CPS1P31327 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC9.89□□□□□ -0.83
CPS1P31327 C2orf71-201ENST00000331664 7044 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
CPS1P31327 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC9.89□□□□□ -0.83
CPS1P31327 CXCR4-201ENST00000241393 1682 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
CPS1P31327 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
CPS1P31327 SPEN-201ENST00000375759 12232 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
CPS1P31327 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
CPS1P31327 FP325330.3-201ENST00000623760 9537 ntBASIC9.89□□□□□ -0.83
CPS1P31327 ZNF234-201ENST00000426739 4551 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
CPS1P31327 ATG13-201ENST00000359513 4348 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
CPS1P31327 KIZ-AS1-203ENST00000616177 5370 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
CPS1P31327 C2orf49-201ENST00000258457 4768 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms