RNA–Protein interactions for RNA: ENST00000543387.1

LINC02420-201, Transcript of long intergenic non-protein coding RNA 2420, humanhuman

TSL 5 BASIC

Gene LINC02420, Length 741 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02420-201ENST00000543387 AEBP2Q6ZN18 517 aaPredicted RBP17.98■□□□□ 0.47
LINC02420-201ENST00000543387 CHIC1Q5VXU3 224 aa17.93■□□□□ 0.46
LINC02420-201ENST00000543387 PHF23Q9BUL5 403 aaPredicted RBP15.89■□□□□ 0.13
LINC02420-201ENST00000543387 NISCHQ9Y2I1 1504 aa15.63■□□□□ 0.09
LINC02420-201ENST00000543387 SENP3Q9H4L4 574 aaPredicted RBP15.07■□□□□ 0
LINC02420-201ENST00000543387 PLPPR3Q6T4P5 718 aa14.73□□□□□ -0.05
LINC02420-201ENST00000543387 ABCC9O60706 1549 aa14.18□□□□□ -0.14
LINC02420-201ENST00000543387 FOXD1Q16676 465 aa14.06□□□□□ -0.16
LINC02420-201ENST00000543387 CCDC180Q9P1Z9 1646 aa14.03□□□□□ -0.16
LINC02420-201ENST00000543387 ADRA2BP18089 450 aa13.94□□□□□ -0.18
LINC02420-201ENST00000543387 PPP6R1Q9UPN7 881 aa13.9□□□□□ -0.18
LINC02420-201ENST00000543387 POTEDQ86YR6 584 aa13.67□□□□□ -0.22
LINC02420-201ENST00000543387 RB1CC1Q8TDY2 1594 aa13.45□□□□□ -0.26
LINC02420-201ENST00000543387 KCNA4P22459 653 aa13.37□□□□□ -0.27
LINC02420-201ENST00000543387 MSH5O43196 834 aa13.36□□□□□ -0.27
LINC02420-201ENST00000543387 DCAF8L2P0C7V8 631 aa13.34□□□□□ -0.27
LINC02420-201ENST00000543387 PIAS4Q8N2W9 510 aaPredicted RBP13.33□□□□□ -0.28
LINC02420-201ENST00000543387 NACADO15069 1562 aa13.32□□□□□ -0.28
LINC02420-201ENST00000543387 DNAJC5BQ9UF47 199 aa13.29□□□□□ -0.28
LINC02420-201ENST00000543387 PABPN1Q86U42 306 aaKnown RBP eCLIP13.2□□□□□ -0.3
LINC02420-201ENST00000543387 MYO15BQ96JP2 1530 aa13.1□□□□□ -0.31
LINC02420-201ENST00000543387 PPP4R3CPQ6ZMV5 832 aa13.1□□□□□ -0.31
LINC02420-201ENST00000543387 EHMT2Q96KQ7 1210 aa13.04□□□□□ -0.32
LINC02420-201ENST00000543387 UNC13AQ9UPW8 1703 aa12.99□□□□□ -0.33
LINC02420-201ENST00000543387 BICRAQ9NZM4 1560 aa12.97□□□□□ -0.33
LINC02420-201ENST00000543387 ZCCHC6Q5VYS8 1495 aaKnown RBP12.95□□□□□ -0.34
LINC02420-201ENST00000543387 DCAF1Q9Y4B6 1507 aa12.9□□□□□ -0.34
LINC02420-201ENST00000543387 SHROOM4Q9ULL8 1493 aa12.89□□□□□ -0.35
LINC02420-201ENST00000543387 SCRIBQ14160 1630 aa12.83□□□□□ -0.36
LINC02420-201ENST00000543387 NCBP3Q53F19 620 aaKnown RBP12.8□□□□□ -0.36
LINC02420-201ENST00000543387 CECR2Q9BXF3 1484 aa12.78□□□□□ -0.36
LINC02420-201ENST00000543387 SLC4A1APQ9BWU0 796 aaKnown RBP12.77□□□□□ -0.37
LINC02420-201ENST00000543387 CC2D2AQ9P2K1 1620 aa12.75□□□□□ -0.37
LINC02420-201ENST00000543387 EIF4G1Q04637 1599 aaKnown RBP12.73□□□□□ -0.37
LINC02420-201ENST00000543387 NPM3O75607 178 aaKnown RBP12.71□□□□□ -0.37
LINC02420-201ENST00000543387 CSRNP3Q8WYN3 585 aa12.61□□□□□ -0.39
LINC02420-201ENST00000543387 CNKSR2Q8WXI2 1034 aa12.57□□□□□ -0.4
LINC02420-201ENST00000543387 SCAF1Q9H7N4 1312 aaKnown RBP12.56□□□□□ -0.4
LINC02420-201ENST00000543387 MAPK8IP2Q13387 824 aaPredicted RBP12.51□□□□□ -0.41
LINC02420-201ENST00000543387 ZBTB22O15209 634 aa12.34□□□□□ -0.43
LINC02420-201ENST00000543387 DNAJC5Q9H3Z4 198 aa12.31□□□□□ -0.44
LINC02420-201ENST00000543387 NCAPD3P42695 1498 aa12.3□□□□□ -0.44
LINC02420-201ENST00000543387 ERCC6Q03468 1493 aa12.3□□□□□ -0.44
LINC02420-201ENST00000543387 ATAD2BQ9ULI0 1458 aa12.26□□□□□ -0.45
LINC02420-201ENST00000543387 CUX2O14529 1486 aa12.25□□□□□ -0.45
LINC02420-201ENST00000543387 SMARCA2P51531 1590 aa12.23□□□□□ -0.45
LINC02420-201ENST00000543387 SMARCA4P51532 1647 aa12.2□□□□□ -0.46
LINC02420-201ENST00000543387 RNF216Q9NWF9 866 aaPredicted RBP12.2□□□□□ -0.46
LINC02420-201ENST00000543387 HMGXB3Q12766 1538 aa12.2□□□□□ -0.46
LINC02420-201ENST00000543387 BAZ1AQ9NRL2 1556 aaPredicted RBP12.18□□□□□ -0.46
LINC02420-201ENST00000543387 BAZ1BQ9UIG0 1483 aaKnown RBP12.17□□□□□ -0.46
LINC02420-201ENST00000543387 DMRT2Q9Y5R5 561 aa12.12□□□□□ -0.47
LINC02420-201ENST00000543387 NESP48681 1621 aa12.11□□□□□ -0.47
LINC02420-201ENST00000543387 FOXD4L1Q9NU39 408 aa12.09□□□□□ -0.47
LINC02420-201ENST00000543387 PEG3Q9GZU2 1588 aa12.06□□□□□ -0.48
LINC02420-201ENST00000543387 MROH2BQ7Z745 1585 aa12.04□□□□□ -0.48
LINC02420-201ENST00000543387 HOXD11P31277 338 aaPredicted RBP12.03□□□□□ -0.48
LINC02420-201ENST00000543387 LAMC3Q9Y6N6 1575 aa12.03□□□□□ -0.48
LINC02420-201ENST00000543387 PDS5BQ9NTI5 1447 aa12.03□□□□□ -0.48
LINC02420-201ENST00000543387 THOC2Q8NI27 1593 aaKnown RBP11.99□□□□□ -0.49
LINC02420-201ENST00000543387 CADPSQ9ULU8 1353 aa11.95□□□□□ -0.5
LINC02420-201ENST00000543387 KIF21AQ7Z4S6 1674 aa11.91□□□□□ -0.5
LINC02420-201ENST00000543387 MRC2Q9UBG0 1479 aa11.9□□□□□ -0.5
LINC02420-201ENST00000543387 SLC4A2P04920 1241 aa11.9□□□□□ -0.5
LINC02420-201ENST00000543387 WIZO95785 1651 aa11.86□□□□□ -0.51
LINC02420-201ENST00000543387 CEP164Q9UPV0 1460 aa11.85□□□□□ -0.51
LINC02420-201ENST00000543387 WDR62O43379 1518 aa11.84□□□□□ -0.51
LINC02420-201ENST00000543387 FANCD2Q9BXW9 1451 aa11.83□□□□□ -0.52
LINC02420-201ENST00000543387 TRIM41Q8WV44 630 aa11.81□□□□□ -0.52
LINC02420-201ENST00000543387 RSF1Q96T23 1441 aaPredicted RBP11.78□□□□□ -0.52
LINC02420-201ENST00000543387 CFTRP13569 1480 aa11.77□□□□□ -0.52
LINC02420-201ENST00000543387 TOP2AP11388 1531 aaKnown RBP11.76□□□□□ -0.53
LINC02420-201ENST00000543387 OSCARQ8IYS5 282 aa11.7□□□□□ -0.54
LINC02420-201ENST00000543387 URB2Q14146 1524 aaKnown RBP11.69□□□□□ -0.54
LINC02420-201ENST00000543387 DCAF8L1A6NGE4 600 aa11.68□□□□□ -0.54
LINC02420-201ENST00000543387 MYCNP04198 464 aaPredicted RBP11.68□□□□□ -0.54
LINC02420-201ENST00000543387 CCDC88BA6NC98 1476 aa11.62□□□□□ -0.55
LINC02420-201ENST00000543387 IFT140Q96RY7 1462 aa11.62□□□□□ -0.55
LINC02420-201ENST00000543387 CACNB1Q02641 598 aaPredicted RBP11.61□□□□□ -0.55
LINC02420-201ENST00000543387 TOPBP1Q92547 1522 aa11.56□□□□□ -0.56
LINC02420-201ENST00000543387 ZNF608Q9ULD9 1512 aaPredicted RBP11.56□□□□□ -0.56
LINC02420-201ENST00000543387 ABCC8Q09428 1581 aa11.56□□□□□ -0.56
LINC02420-201ENST00000543387 PRDM2Q13029 1718 aa11.55□□□□□ -0.56
LINC02420-201ENST00000543387 ATXN8OSP0DMR3 200 aa11.55□□□□□ -0.56
LINC02420-201ENST00000543387 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.53□□□□□ -0.56
LINC02420-201ENST00000543387 DNMBPQ6XZF7 1577 aa11.52□□□□□ -0.57
LINC02420-201ENST00000543387 EIF4G3O43432 1585 aaKnown RBP11.5□□□□□ -0.57
LINC02420-201ENST00000543387 FBLN2P98095 1184 aa11.49□□□□□ -0.57
LINC02420-201ENST00000543387 ARHGEF11O15085 1522 aa11.48□□□□□ -0.57
LINC02420-201ENST00000543387 RIMBP3CA6NJZ7 1639 aa11.48□□□□□ -0.57
LINC02420-201ENST00000543387 RIMBP3BA6NNM3 1639 aa11.48□□□□□ -0.57
LINC02420-201ENST00000543387 RIMBP3Q9UFD9 1639 aa11.48□□□□□ -0.57
LINC02420-201ENST00000543387 AQRO60306 1485 aaKnown RBP eCLIP11.46□□□□□ -0.57
LINC02420-201ENST00000543387 ATF5Q9Y2D1 282 aaPredicted RBP11.46□□□□□ -0.57
LINC02420-201ENST00000543387 POLA1P09884 1462 aaPredicted RBP11.44□□□□□ -0.58
LINC02420-201ENST00000543387 CYB5RLQ6IPT4 315 aa11.44□□□□□ -0.58
LINC02420-201ENST00000543387 SOGA1O94964 1423 aa11.42□□□□□ -0.58
LINC02420-201ENST00000543387 TARBP1Q13395 1621 aaKnown RBP11.42□□□□□ -0.58
LINC02420-201ENST00000543387 TDRD9Q8NDG6 1382 aaKnown RBP11.41□□□□□ -0.58
LINC02420-201ENST00000543387 RAD54L2Q9Y4B4 1467 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 326.1 ms