Protein–RNA interactions for Protein: Q9Y5F1

PCDHB12, Protocadherin beta-12, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB12Q9Y5F1 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
PCDHB12Q9Y5F1 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.58■■□□□ 1.05
PCDHB12Q9Y5F1 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHB12Q9Y5F1 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHB12Q9Y5F1 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHB12Q9Y5F1 KRT8P36-201ENST00000489121 1440 ntBASIC21.58■■□□□ 1.05
PCDHB12Q9Y5F1 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHB12Q9Y5F1 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHB12Q9Y5F1 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHB12Q9Y5F1 FAM197Y1-201ENST00000421178 764 ntBASIC21.58■■□□□ 1.05
PCDHB12Q9Y5F1 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC21.58■■□□□ 1.05
PCDHB12Q9Y5F1 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC21.58■■□□□ 1.05
PCDHB12Q9Y5F1 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHB12Q9Y5F1 AC073195.1-201ENST00000607241 877 ntBASIC21.58■■□□□ 1.05
PCDHB12Q9Y5F1 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHB12Q9Y5F1 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
PCDHB12Q9Y5F1 AC027702.1-201ENST00000563810 1770 ntBASIC21.58■■□□□ 1.04
PCDHB12Q9Y5F1 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.58■■□□□ 1.04
PCDHB12Q9Y5F1 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.58■■□□□ 1.04
PCDHB12Q9Y5F1 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
PCDHB12Q9Y5F1 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PCDHB12Q9Y5F1 AC026310.3-201ENST00000625186 2373 ntBASIC21.58■■□□□ 1.04
PCDHB12Q9Y5F1 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
PCDHB12Q9Y5F1 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.57■■□□□ 1.04
PCDHB12Q9Y5F1 AC124283.5-201ENST00000624661 1809 ntBASIC21.57■■□□□ 1.04
PCDHB12Q9Y5F1 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHB12Q9Y5F1 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHB12Q9Y5F1 TREX2-204ENST00000370212 861 ntTSL 5 BASIC21.57■■□□□ 1.04
PCDHB12Q9Y5F1 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
PCDHB12Q9Y5F1 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
PCDHB12Q9Y5F1 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
PCDHB12Q9Y5F1 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHB12Q9Y5F1 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.57■■□□□ 1.04
PCDHB12Q9Y5F1 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHB12Q9Y5F1 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.57■■□□□ 1.04
PCDHB12Q9Y5F1 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC21.57■■□□□ 1.04
PCDHB12Q9Y5F1 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC21.57■■□□□ 1.04
PCDHB12Q9Y5F1 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.57■■□□□ 1.04
PCDHB12Q9Y5F1 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHB12Q9Y5F1 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.57■■□□□ 1.04
PCDHB12Q9Y5F1 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHB12Q9Y5F1 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHB12Q9Y5F1 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.56■■□□□ 1.04
PCDHB12Q9Y5F1 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21.56■■□□□ 1.04
PCDHB12Q9Y5F1 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHB12Q9Y5F1 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.56■■□□□ 1.04
PCDHB12Q9Y5F1 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHB12Q9Y5F1 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHB12Q9Y5F1 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHB12Q9Y5F1 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHB12Q9Y5F1 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
PCDHB12Q9Y5F1 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHB12Q9Y5F1 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHB12Q9Y5F1 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.56■■□□□ 1.04
PCDHB12Q9Y5F1 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.56■■□□□ 1.04
PCDHB12Q9Y5F1 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
PCDHB12Q9Y5F1 MIR2861-201ENST00000636310 90 ntBASIC21.56■■□□□ 1.04
PCDHB12Q9Y5F1 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHB12Q9Y5F1 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHB12Q9Y5F1 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
PCDHB12Q9Y5F1 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.55■■□□□ 1.04
PCDHB12Q9Y5F1 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHB12Q9Y5F1 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC21.55■■□□□ 1.04
PCDHB12Q9Y5F1 TMPOP1-202ENST00000424642 1267 ntBASIC21.55■■□□□ 1.04
PCDHB12Q9Y5F1 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC21.55■■□□□ 1.04
PCDHB12Q9Y5F1 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
PCDHB12Q9Y5F1 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
PCDHB12Q9Y5F1 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
PCDHB12Q9Y5F1 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC21.55■■□□□ 1.04
PCDHB12Q9Y5F1 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.55■■□□□ 1.04
PCDHB12Q9Y5F1 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.55■■□□□ 1.04
PCDHB12Q9Y5F1 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHB12Q9Y5F1 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHB12Q9Y5F1 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHB12Q9Y5F1 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHB12Q9Y5F1 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHB12Q9Y5F1 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
PCDHB12Q9Y5F1 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC21.55■■□□□ 1.04
PCDHB12Q9Y5F1 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.54■■□□□ 1.04
PCDHB12Q9Y5F1 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHB12Q9Y5F1 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHB12Q9Y5F1 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.54■■□□□ 1.04
PCDHB12Q9Y5F1 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHB12Q9Y5F1 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC21.54■■□□□ 1.04
PCDHB12Q9Y5F1 CBFB-203ENST00000561924 584 ntTSL 5 BASIC21.54■■□□□ 1.04
PCDHB12Q9Y5F1 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHB12Q9Y5F1 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
PCDHB12Q9Y5F1 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.54■■□□□ 1.04
PCDHB12Q9Y5F1 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHB12Q9Y5F1 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHB12Q9Y5F1 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.53■■□□□ 1.04
PCDHB12Q9Y5F1 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHB12Q9Y5F1 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHB12Q9Y5F1 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.53■■□□□ 1.04
PCDHB12Q9Y5F1 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHB12Q9Y5F1 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
PCDHB12Q9Y5F1 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHB12Q9Y5F1 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHB12Q9Y5F1 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHB12Q9Y5F1 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms