Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SATB2Q9UPW6 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SATB2Q9UPW6 KRT18P21-201ENST00000515767 1272 ntBASIC19.57■□□□□ 0.72
SATB2Q9UPW6 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.57■□□□□ 0.72
SATB2Q9UPW6 AC124016.1-201ENST00000609552 612 ntBASIC19.57■□□□□ 0.72
SATB2Q9UPW6 AC010331.1-201ENST00000611423 582 ntBASIC19.57■□□□□ 0.72
SATB2Q9UPW6 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
SATB2Q9UPW6 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SATB2Q9UPW6 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SATB2Q9UPW6 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SATB2Q9UPW6 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SATB2Q9UPW6 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SATB2Q9UPW6 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SATB2Q9UPW6 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
SATB2Q9UPW6 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SATB2Q9UPW6 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SATB2Q9UPW6 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SATB2Q9UPW6 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SATB2Q9UPW6 KRT17P2-201ENST00000300992 1314 ntBASIC19.56■□□□□ 0.72
SATB2Q9UPW6 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.56■□□□□ 0.72
SATB2Q9UPW6 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.56■□□□□ 0.72
SATB2Q9UPW6 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SATB2Q9UPW6 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SATB2Q9UPW6 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SATB2Q9UPW6 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.56■□□□□ 0.72
SATB2Q9UPW6 AC239809.2-201ENST00000415381 517 ntBASIC19.56■□□□□ 0.72
SATB2Q9UPW6 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.56■□□□□ 0.72
SATB2Q9UPW6 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.56■□□□□ 0.72
SATB2Q9UPW6 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SATB2Q9UPW6 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SATB2Q9UPW6 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SATB2Q9UPW6 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.56■□□□□ 0.72
SATB2Q9UPW6 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SATB2Q9UPW6 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SATB2Q9UPW6 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SATB2Q9UPW6 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SATB2Q9UPW6 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.56■□□□□ 0.72
SATB2Q9UPW6 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SATB2Q9UPW6 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.56■□□□□ 0.72
SATB2Q9UPW6 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SATB2Q9UPW6 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SATB2Q9UPW6 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.56■□□□□ 0.72
SATB2Q9UPW6 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SATB2Q9UPW6 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.55■□□□□ 0.72
SATB2Q9UPW6 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SATB2Q9UPW6 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SATB2Q9UPW6 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SATB2Q9UPW6 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SATB2Q9UPW6 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.55■□□□□ 0.72
SATB2Q9UPW6 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.55■□□□□ 0.72
SATB2Q9UPW6 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.55■□□□□ 0.72
SATB2Q9UPW6 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SATB2Q9UPW6 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.55■□□□□ 0.72
SATB2Q9UPW6 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
SATB2Q9UPW6 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
SATB2Q9UPW6 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.55■□□□□ 0.72
SATB2Q9UPW6 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.55■□□□□ 0.72
SATB2Q9UPW6 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.55■□□□□ 0.72
SATB2Q9UPW6 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SATB2Q9UPW6 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.55■□□□□ 0.72
SATB2Q9UPW6 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SATB2Q9UPW6 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
SATB2Q9UPW6 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SATB2Q9UPW6 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SATB2Q9UPW6 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SATB2Q9UPW6 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SATB2Q9UPW6 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.54■□□□□ 0.72
SATB2Q9UPW6 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SATB2Q9UPW6 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.54■□□□□ 0.72
SATB2Q9UPW6 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
SATB2Q9UPW6 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SATB2Q9UPW6 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SATB2Q9UPW6 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
SATB2Q9UPW6 AL049637.2-201ENST00000641778 930 ntBASIC19.54■□□□□ 0.72
SATB2Q9UPW6 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SATB2Q9UPW6 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.54■□□□□ 0.72
SATB2Q9UPW6 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SATB2Q9UPW6 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.54■□□□□ 0.72
SATB2Q9UPW6 AL391422.3-201ENST00000603791 2761 ntBASIC19.54■□□□□ 0.72
SATB2Q9UPW6 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SATB2Q9UPW6 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.54■□□□□ 0.72
SATB2Q9UPW6 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.53■□□□□ 0.72
SATB2Q9UPW6 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
SATB2Q9UPW6 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
SATB2Q9UPW6 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
SATB2Q9UPW6 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SATB2Q9UPW6 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SATB2Q9UPW6 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.53■□□□□ 0.72
SATB2Q9UPW6 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SATB2Q9UPW6 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
SATB2Q9UPW6 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SATB2Q9UPW6 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SATB2Q9UPW6 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
SATB2Q9UPW6 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.53■□□□□ 0.72
SATB2Q9UPW6 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.53■□□□□ 0.72
SATB2Q9UPW6 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
SATB2Q9UPW6 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.53■□□□□ 0.72
SATB2Q9UPW6 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
SATB2Q9UPW6 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SATB2Q9UPW6 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms