Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGC3Q9UN70 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHGC3Q9UN70 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHGC3Q9UN70 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
PCDHGC3Q9UN70 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
PCDHGC3Q9UN70 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.17■□□□□ 0.98
PCDHGC3Q9UN70 AC083880.1-201ENST00000608266 535 ntBASIC21.17■□□□□ 0.98
PCDHGC3Q9UN70 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHGC3Q9UN70 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHGC3Q9UN70 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
PCDHGC3Q9UN70 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.17■□□□□ 0.98
PCDHGC3Q9UN70 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHGC3Q9UN70 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
PCDHGC3Q9UN70 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.17■□□□□ 0.98
PCDHGC3Q9UN70 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHGC3Q9UN70 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHGC3Q9UN70 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHGC3Q9UN70 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.17■□□□□ 0.98
PCDHGC3Q9UN70 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHGC3Q9UN70 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHGC3Q9UN70 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHGC3Q9UN70 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHGC3Q9UN70 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHGC3Q9UN70 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHGC3Q9UN70 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHGC3Q9UN70 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.16■□□□□ 0.98
PCDHGC3Q9UN70 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHGC3Q9UN70 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.16■□□□□ 0.98
PCDHGC3Q9UN70 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.16■□□□□ 0.98
PCDHGC3Q9UN70 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.16■□□□□ 0.98
PCDHGC3Q9UN70 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.16■□□□□ 0.98
PCDHGC3Q9UN70 AC005829.2-201ENST00000571422 1056 ntBASIC21.16■□□□□ 0.98
PCDHGC3Q9UN70 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.16■□□□□ 0.98
PCDHGC3Q9UN70 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHGC3Q9UN70 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.15■□□□□ 0.98
PCDHGC3Q9UN70 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGC3Q9UN70 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGC3Q9UN70 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.15■□□□□ 0.98
PCDHGC3Q9UN70 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGC3Q9UN70 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGC3Q9UN70 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGC3Q9UN70 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGC3Q9UN70 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGC3Q9UN70 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGC3Q9UN70 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGC3Q9UN70 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGC3Q9UN70 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
PCDHGC3Q9UN70 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.15■□□□□ 0.98
PCDHGC3Q9UN70 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.15■□□□□ 0.98
PCDHGC3Q9UN70 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGC3Q9UN70 HLA-B-256ENST00000639848 1089 ntBASIC21.15■□□□□ 0.98
PCDHGC3Q9UN70 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGC3Q9UN70 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGC3Q9UN70 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGC3Q9UN70 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGC3Q9UN70 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.15■□□□□ 0.98
PCDHGC3Q9UN70 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
PCDHGC3Q9UN70 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
PCDHGC3Q9UN70 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
PCDHGC3Q9UN70 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PCDHGC3Q9UN70 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
PCDHGC3Q9UN70 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.14■□□□□ 0.98
PCDHGC3Q9UN70 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHGC3Q9UN70 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.14■□□□□ 0.97
PCDHGC3Q9UN70 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHGC3Q9UN70 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
PCDHGC3Q9UN70 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.14■□□□□ 0.97
PCDHGC3Q9UN70 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHGC3Q9UN70 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.14■□□□□ 0.97
PCDHGC3Q9UN70 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.14■□□□□ 0.97
PCDHGC3Q9UN70 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.14■□□□□ 0.97
PCDHGC3Q9UN70 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.14■□□□□ 0.97
PCDHGC3Q9UN70 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
PCDHGC3Q9UN70 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHGC3Q9UN70 TMEM179-206ENST00000616017 1645 ntBASIC21.14■□□□□ 0.97
PCDHGC3Q9UN70 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.14■□□□□ 0.97
PCDHGC3Q9UN70 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.13■□□□□ 0.97
PCDHGC3Q9UN70 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHGC3Q9UN70 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
PCDHGC3Q9UN70 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHGC3Q9UN70 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
PCDHGC3Q9UN70 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHGC3Q9UN70 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHGC3Q9UN70 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
PCDHGC3Q9UN70 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHGC3Q9UN70 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHGC3Q9UN70 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHGC3Q9UN70 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.13■□□□□ 0.97
PCDHGC3Q9UN70 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.13■□□□□ 0.97
PCDHGC3Q9UN70 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHGC3Q9UN70 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHGC3Q9UN70 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHGC3Q9UN70 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHGC3Q9UN70 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHGC3Q9UN70 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
PCDHGC3Q9UN70 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.13■□□□□ 0.97
PCDHGC3Q9UN70 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
PCDHGC3Q9UN70 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHGC3Q9UN70 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHGC3Q9UN70 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms