Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
HMG20AQ9NP66 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HMG20AQ9NP66 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HMG20AQ9NP66 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
HMG20AQ9NP66 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HMG20AQ9NP66 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
HMG20AQ9NP66 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
HMG20AQ9NP66 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
HMG20AQ9NP66 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
HMG20AQ9NP66 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HMG20AQ9NP66 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
HMG20AQ9NP66 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
HMG20AQ9NP66 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
HMG20AQ9NP66 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HMG20AQ9NP66 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HMG20AQ9NP66 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.14■□□□□ 0.49
HMG20AQ9NP66 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.14■□□□□ 0.49
HMG20AQ9NP66 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.14■□□□□ 0.49
HMG20AQ9NP66 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.14■□□□□ 0.49
HMG20AQ9NP66 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
HMG20AQ9NP66 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HMG20AQ9NP66 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HMG20AQ9NP66 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HMG20AQ9NP66 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HMG20AQ9NP66 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HMG20AQ9NP66 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.14■□□□□ 0.49
HMG20AQ9NP66 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
HMG20AQ9NP66 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HMG20AQ9NP66 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
HMG20AQ9NP66 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HMG20AQ9NP66 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HMG20AQ9NP66 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
HMG20AQ9NP66 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.13■□□□□ 0.49
HMG20AQ9NP66 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
HMG20AQ9NP66 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
HMG20AQ9NP66 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HMG20AQ9NP66 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
HMG20AQ9NP66 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HMG20AQ9NP66 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.13■□□□□ 0.49
HMG20AQ9NP66 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HMG20AQ9NP66 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HMG20AQ9NP66 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
HMG20AQ9NP66 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
HMG20AQ9NP66 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.13■□□□□ 0.49
HMG20AQ9NP66 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HMG20AQ9NP66 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
HMG20AQ9NP66 BX842568.3-201ENST00000418104 571 ntBASIC18.13■□□□□ 0.49
HMG20AQ9NP66 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HMG20AQ9NP66 MIR4767-201ENST00000582827 78 ntBASIC18.13■□□□□ 0.49
HMG20AQ9NP66 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.13■□□□□ 0.49
HMG20AQ9NP66 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HMG20AQ9NP66 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HMG20AQ9NP66 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HMG20AQ9NP66 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.13■□□□□ 0.49
HMG20AQ9NP66 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HMG20AQ9NP66 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMG20AQ9NP66 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMG20AQ9NP66 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.12■□□□□ 0.49
HMG20AQ9NP66 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HMG20AQ9NP66 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HMG20AQ9NP66 Z82202.1-201ENST00000623446 1880 ntBASIC18.12■□□□□ 0.49
HMG20AQ9NP66 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMG20AQ9NP66 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMG20AQ9NP66 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMG20AQ9NP66 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMG20AQ9NP66 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
HMG20AQ9NP66 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMG20AQ9NP66 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
HMG20AQ9NP66 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.12■□□□□ 0.49
HMG20AQ9NP66 AL034346.1-201ENST00000568244 1277 ntBASIC18.12■□□□□ 0.49
HMG20AQ9NP66 AL136162.1-201ENST00000607711 1078 ntBASIC18.12■□□□□ 0.49
HMG20AQ9NP66 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMG20AQ9NP66 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMG20AQ9NP66 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMG20AQ9NP66 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMG20AQ9NP66 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMG20AQ9NP66 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.12■□□□□ 0.49
HMG20AQ9NP66 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMG20AQ9NP66 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.12■□□□□ 0.49
HMG20AQ9NP66 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMG20AQ9NP66 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMG20AQ9NP66 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.11■□□□□ 0.49
HMG20AQ9NP66 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMG20AQ9NP66 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.11■□□□□ 0.49
HMG20AQ9NP66 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMG20AQ9NP66 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
HMG20AQ9NP66 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMG20AQ9NP66 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMG20AQ9NP66 FZD10-202ENST00000539839 3282 ntBASIC18.11■□□□□ 0.49
HMG20AQ9NP66 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
HMG20AQ9NP66 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HMG20AQ9NP66 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HMG20AQ9NP66 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMG20AQ9NP66 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
HMG20AQ9NP66 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.11■□□□□ 0.49
HMG20AQ9NP66 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.11■□□□□ 0.49
HMG20AQ9NP66 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.11■□□□□ 0.49
HMG20AQ9NP66 AC024257.2-201ENST00000549699 147 ntBASIC18.11■□□□□ 0.49
HMG20AQ9NP66 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
HMG20AQ9NP66 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms