Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
SND1-IT1Q9HBX3 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SND1-IT1Q9HBX3 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC13.39□□□□□ -0.27
SND1-IT1Q9HBX3 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SND1-IT1Q9HBX3 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SND1-IT1Q9HBX3 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SND1-IT1Q9HBX3 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SND1-IT1Q9HBX3 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC13.39□□□□□ -0.27
SND1-IT1Q9HBX3 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
SND1-IT1Q9HBX3 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SND1-IT1Q9HBX3 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
SND1-IT1Q9HBX3 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SND1-IT1Q9HBX3 AL356441.2-201ENST00000443009 864 ntBASIC13.39□□□□□ -0.27
SND1-IT1Q9HBX3 AICDA-202ENST00000537228 667 ntTSL 5 BASIC13.39□□□□□ -0.27
SND1-IT1Q9HBX3 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC13.39□□□□□ -0.27
SND1-IT1Q9HBX3 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC13.39□□□□□ -0.27
SND1-IT1Q9HBX3 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC13.39□□□□□ -0.27
SND1-IT1Q9HBX3 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SND1-IT1Q9HBX3 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
SND1-IT1Q9HBX3 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SND1-IT1Q9HBX3 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SND1-IT1Q9HBX3 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SND1-IT1Q9HBX3 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC13.39□□□□□ -0.27
SND1-IT1Q9HBX3 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SND1-IT1Q9HBX3 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SND1-IT1Q9HBX3 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SND1-IT1Q9HBX3 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC13.39□□□□□ -0.27
SND1-IT1Q9HBX3 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SND1-IT1Q9HBX3 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC13.39□□□□□ -0.27
SND1-IT1Q9HBX3 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SND1-IT1Q9HBX3 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SND1-IT1Q9HBX3 EML3-217ENST00000531557 2509 ntTSL 5 BASIC13.39□□□□□ -0.27
SND1-IT1Q9HBX3 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
SND1-IT1Q9HBX3 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SND1-IT1Q9HBX3 AC005332.7-201ENST00000614046 2005 ntBASIC13.39□□□□□ -0.27
SND1-IT1Q9HBX3 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC13.39□□□□□ -0.27
SND1-IT1Q9HBX3 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC13.39□□□□□ -0.27
SND1-IT1Q9HBX3 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC13.39□□□□□ -0.27
SND1-IT1Q9HBX3 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SND1-IT1Q9HBX3 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SND1-IT1Q9HBX3 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SND1-IT1Q9HBX3 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SND1-IT1Q9HBX3 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SND1-IT1Q9HBX3 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SND1-IT1Q9HBX3 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SND1-IT1Q9HBX3 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
SND1-IT1Q9HBX3 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SND1-IT1Q9HBX3 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SND1-IT1Q9HBX3 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SND1-IT1Q9HBX3 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SND1-IT1Q9HBX3 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC13.38□□□□□ -0.27
SND1-IT1Q9HBX3 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
SND1-IT1Q9HBX3 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SND1-IT1Q9HBX3 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
SND1-IT1Q9HBX3 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
SND1-IT1Q9HBX3 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
SND1-IT1Q9HBX3 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
SND1-IT1Q9HBX3 LHPP-203ENST00000392757 840 ntTSL 3 BASIC13.38□□□□□ -0.27
SND1-IT1Q9HBX3 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SND1-IT1Q9HBX3 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC13.38□□□□□ -0.27
SND1-IT1Q9HBX3 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC13.38□□□□□ -0.27
SND1-IT1Q9HBX3 AC105233.4-201ENST00000642045 216 ntBASIC13.38□□□□□ -0.27
SND1-IT1Q9HBX3 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
SND1-IT1Q9HBX3 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SND1-IT1Q9HBX3 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
SND1-IT1Q9HBX3 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SND1-IT1Q9HBX3 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SND1-IT1Q9HBX3 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SND1-IT1Q9HBX3 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SND1-IT1Q9HBX3 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SND1-IT1Q9HBX3 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SND1-IT1Q9HBX3 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC13.38□□□□□ -0.27
SND1-IT1Q9HBX3 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SND1-IT1Q9HBX3 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC13.38□□□□□ -0.27
SND1-IT1Q9HBX3 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SND1-IT1Q9HBX3 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SND1-IT1Q9HBX3 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
SND1-IT1Q9HBX3 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SND1-IT1Q9HBX3 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SND1-IT1Q9HBX3 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC13.37□□□□□ -0.27
SND1-IT1Q9HBX3 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC13.37□□□□□ -0.27
SND1-IT1Q9HBX3 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SND1-IT1Q9HBX3 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SND1-IT1Q9HBX3 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SND1-IT1Q9HBX3 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SND1-IT1Q9HBX3 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SND1-IT1Q9HBX3 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SND1-IT1Q9HBX3 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SND1-IT1Q9HBX3 AC131281.2-201ENST00000520478 145 ntBASIC13.37□□□□□ -0.27
SND1-IT1Q9HBX3 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SND1-IT1Q9HBX3 AC053503.5-201ENST00000601508 636 ntBASIC13.37□□□□□ -0.27
SND1-IT1Q9HBX3 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC13.37□□□□□ -0.27
SND1-IT1Q9HBX3 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SND1-IT1Q9HBX3 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC13.37□□□□□ -0.27
SND1-IT1Q9HBX3 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SND1-IT1Q9HBX3 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SND1-IT1Q9HBX3 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
SND1-IT1Q9HBX3 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SND1-IT1Q9HBX3 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SND1-IT1Q9HBX3 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms