Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NR1H4Q96RI1 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
NR1H4Q96RI1 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NR1H4Q96RI1 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.84■□□□□ 0.61
NR1H4Q96RI1 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NR1H4Q96RI1 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
NR1H4Q96RI1 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
NR1H4Q96RI1 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.84■□□□□ 0.61
NR1H4Q96RI1 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
NR1H4Q96RI1 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NR1H4Q96RI1 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NR1H4Q96RI1 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
NR1H4Q96RI1 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
NR1H4Q96RI1 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.84■□□□□ 0.61
NR1H4Q96RI1 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
NR1H4Q96RI1 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NR1H4Q96RI1 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NR1H4Q96RI1 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
NR1H4Q96RI1 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NR1H4Q96RI1 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NR1H4Q96RI1 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
NR1H4Q96RI1 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.83■□□□□ 0.61
NR1H4Q96RI1 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.83■□□□□ 0.61
NR1H4Q96RI1 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
NR1H4Q96RI1 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NR1H4Q96RI1 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
NR1H4Q96RI1 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.83■□□□□ 0.61
NR1H4Q96RI1 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NR1H4Q96RI1 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.83■□□□□ 0.6
NR1H4Q96RI1 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NR1H4Q96RI1 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
NR1H4Q96RI1 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
NR1H4Q96RI1 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NR1H4Q96RI1 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
NR1H4Q96RI1 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.83■□□□□ 0.6
NR1H4Q96RI1 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.83■□□□□ 0.6
NR1H4Q96RI1 AC090340.1-201ENST00000620778 4980 ntBASIC18.83■□□□□ 0.6
NR1H4Q96RI1 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NR1H4Q96RI1 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.83■□□□□ 0.6
NR1H4Q96RI1 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NR1H4Q96RI1 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
NR1H4Q96RI1 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.83■□□□□ 0.6
NR1H4Q96RI1 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NR1H4Q96RI1 AC104581.1-202ENST00000635932 2618 ntBASIC18.83■□□□□ 0.6
NR1H4Q96RI1 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
NR1H4Q96RI1 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.82■□□□□ 0.6
NR1H4Q96RI1 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.82■□□□□ 0.6
NR1H4Q96RI1 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NR1H4Q96RI1 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NR1H4Q96RI1 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.82■□□□□ 0.6
NR1H4Q96RI1 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
NR1H4Q96RI1 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NR1H4Q96RI1 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
NR1H4Q96RI1 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NR1H4Q96RI1 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.82■□□□□ 0.6
NR1H4Q96RI1 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NR1H4Q96RI1 AC092028.1-203ENST00000608262 953 ntBASIC18.82■□□□□ 0.6
NR1H4Q96RI1 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.82■□□□□ 0.6
NR1H4Q96RI1 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NR1H4Q96RI1 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NR1H4Q96RI1 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NR1H4Q96RI1 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NR1H4Q96RI1 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.82■□□□□ 0.6
NR1H4Q96RI1 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
NR1H4Q96RI1 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
NR1H4Q96RI1 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NR1H4Q96RI1 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.82■□□□□ 0.6
NR1H4Q96RI1 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NR1H4Q96RI1 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.82■□□□□ 0.6
NR1H4Q96RI1 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
NR1H4Q96RI1 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
NR1H4Q96RI1 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NR1H4Q96RI1 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NR1H4Q96RI1 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NR1H4Q96RI1 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NR1H4Q96RI1 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NR1H4Q96RI1 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC18.81■□□□□ 0.6
NR1H4Q96RI1 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NR1H4Q96RI1 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.81■□□□□ 0.6
NR1H4Q96RI1 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.81■□□□□ 0.6
NR1H4Q96RI1 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.81■□□□□ 0.6
NR1H4Q96RI1 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.81■□□□□ 0.6
NR1H4Q96RI1 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.81■□□□□ 0.6
NR1H4Q96RI1 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.81■□□□□ 0.6
NR1H4Q96RI1 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.81■□□□□ 0.6
NR1H4Q96RI1 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NR1H4Q96RI1 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NR1H4Q96RI1 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.8■□□□□ 0.6
NR1H4Q96RI1 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.8■□□□□ 0.6
NR1H4Q96RI1 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NR1H4Q96RI1 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NR1H4Q96RI1 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.8■□□□□ 0.6
NR1H4Q96RI1 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.8■□□□□ 0.6
NR1H4Q96RI1 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
NR1H4Q96RI1 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
NR1H4Q96RI1 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NR1H4Q96RI1 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.8■□□□□ 0.6
NR1H4Q96RI1 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
NR1H4Q96RI1 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NR1H4Q96RI1 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms