Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.59■□□□□ 0.73
PDLIM5Q96HC4 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
PDLIM5Q96HC4 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.59■□□□□ 0.73
PDLIM5Q96HC4 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDLIM5Q96HC4 AC125437.2-201ENST00000625180 2167 ntBASIC19.59■□□□□ 0.73
PDLIM5Q96HC4 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PDLIM5Q96HC4 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PDLIM5Q96HC4 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PDLIM5Q96HC4 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PDLIM5Q96HC4 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PDLIM5Q96HC4 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.58■□□□□ 0.72
PDLIM5Q96HC4 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.58■□□□□ 0.72
PDLIM5Q96HC4 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.58■□□□□ 0.72
PDLIM5Q96HC4 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.58■□□□□ 0.72
PDLIM5Q96HC4 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PDLIM5Q96HC4 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PDLIM5Q96HC4 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PDLIM5Q96HC4 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PDLIM5Q96HC4 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PDLIM5Q96HC4 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PDLIM5Q96HC4 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PDLIM5Q96HC4 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PDLIM5Q96HC4 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
PDLIM5Q96HC4 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDLIM5Q96HC4 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PDLIM5Q96HC4 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDLIM5Q96HC4 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
PDLIM5Q96HC4 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.57■□□□□ 0.72
PDLIM5Q96HC4 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDLIM5Q96HC4 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.57■□□□□ 0.72
PDLIM5Q96HC4 GPX1P1-201ENST00000388829 606 ntBASIC19.57■□□□□ 0.72
PDLIM5Q96HC4 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PDLIM5Q96HC4 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.57■□□□□ 0.72
PDLIM5Q96HC4 BX276092.2-201ENST00000417668 665 ntBASIC19.57■□□□□ 0.72
PDLIM5Q96HC4 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PDLIM5Q96HC4 AC083906.2-201ENST00000511578 360 ntBASIC19.57■□□□□ 0.72
PDLIM5Q96HC4 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.57■□□□□ 0.72
PDLIM5Q96HC4 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PDLIM5Q96HC4 AL121832.2-201ENST00000610979 668 ntBASIC19.57■□□□□ 0.72
PDLIM5Q96HC4 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
PDLIM5Q96HC4 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PDLIM5Q96HC4 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.57■□□□□ 0.72
PDLIM5Q96HC4 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDLIM5Q96HC4 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDLIM5Q96HC4 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDLIM5Q96HC4 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.57■□□□□ 0.72
PDLIM5Q96HC4 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.57■□□□□ 0.72
PDLIM5Q96HC4 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDLIM5Q96HC4 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDLIM5Q96HC4 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.56■□□□□ 0.72
PDLIM5Q96HC4 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDLIM5Q96HC4 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.56■□□□□ 0.72
PDLIM5Q96HC4 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDLIM5Q96HC4 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
PDLIM5Q96HC4 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.56■□□□□ 0.72
PDLIM5Q96HC4 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.56■□□□□ 0.72
PDLIM5Q96HC4 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
PDLIM5Q96HC4 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.56■□□□□ 0.72
PDLIM5Q96HC4 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDLIM5Q96HC4 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PDLIM5Q96HC4 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDLIM5Q96HC4 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.56■□□□□ 0.72
PDLIM5Q96HC4 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PDLIM5Q96HC4 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDLIM5Q96HC4 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDLIM5Q96HC4 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.55■□□□□ 0.72
PDLIM5Q96HC4 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PDLIM5Q96HC4 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDLIM5Q96HC4 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDLIM5Q96HC4 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
PDLIM5Q96HC4 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDLIM5Q96HC4 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.55■□□□□ 0.72
PDLIM5Q96HC4 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
PDLIM5Q96HC4 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
PDLIM5Q96HC4 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.55■□□□□ 0.72
PDLIM5Q96HC4 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
PDLIM5Q96HC4 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.55■□□□□ 0.72
PDLIM5Q96HC4 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
PDLIM5Q96HC4 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
PDLIM5Q96HC4 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDLIM5Q96HC4 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PDLIM5Q96HC4 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
PDLIM5Q96HC4 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.55■□□□□ 0.72
PDLIM5Q96HC4 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDLIM5Q96HC4 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDLIM5Q96HC4 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDLIM5Q96HC4 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.54■□□□□ 0.72
PDLIM5Q96HC4 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDLIM5Q96HC4 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PDLIM5Q96HC4 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDLIM5Q96HC4 MIPEPP3-201ENST00000412105 444 ntBASIC19.54■□□□□ 0.72
PDLIM5Q96HC4 NCF1B-203ENST00000435988 1254 ntBASIC19.54■□□□□ 0.72
PDLIM5Q96HC4 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.54■□□□□ 0.72
PDLIM5Q96HC4 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.54■□□□□ 0.72
PDLIM5Q96HC4 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.54■□□□□ 0.72
PDLIM5Q96HC4 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.54■□□□□ 0.72
PDLIM5Q96HC4 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.54■□□□□ 0.72
PDLIM5Q96HC4 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDLIM5Q96HC4 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PDLIM5Q96HC4 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms