Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SH3KBP1Q96B97 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.8■□□□□ 0.76
SH3KBP1Q96B97 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SH3KBP1Q96B97 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SH3KBP1Q96B97 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.8■□□□□ 0.76
SH3KBP1Q96B97 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SH3KBP1Q96B97 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SH3KBP1Q96B97 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
SH3KBP1Q96B97 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SH3KBP1Q96B97 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.8■□□□□ 0.76
SH3KBP1Q96B97 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SH3KBP1Q96B97 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SH3KBP1Q96B97 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.8■□□□□ 0.76
SH3KBP1Q96B97 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.8■□□□□ 0.76
SH3KBP1Q96B97 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.8■□□□□ 0.76
SH3KBP1Q96B97 AC006058.3-201ENST00000606217 1069 ntBASIC19.8■□□□□ 0.76
SH3KBP1Q96B97 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
SH3KBP1Q96B97 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.8■□□□□ 0.76
SH3KBP1Q96B97 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SH3KBP1Q96B97 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SH3KBP1Q96B97 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SH3KBP1Q96B97 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SH3KBP1Q96B97 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SH3KBP1Q96B97 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SH3KBP1Q96B97 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SH3KBP1Q96B97 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SH3KBP1Q96B97 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SH3KBP1Q96B97 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SH3KBP1Q96B97 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.79■□□□□ 0.76
SH3KBP1Q96B97 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SH3KBP1Q96B97 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SH3KBP1Q96B97 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SH3KBP1Q96B97 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SH3KBP1Q96B97 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
SH3KBP1Q96B97 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.79■□□□□ 0.76
SH3KBP1Q96B97 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.79■□□□□ 0.76
SH3KBP1Q96B97 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.79■□□□□ 0.76
SH3KBP1Q96B97 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SH3KBP1Q96B97 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SH3KBP1Q96B97 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.79■□□□□ 0.76
SH3KBP1Q96B97 LINC01006-201ENST00000333319 2292 ntBASIC19.79■□□□□ 0.76
SH3KBP1Q96B97 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.79■□□□□ 0.76
SH3KBP1Q96B97 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SH3KBP1Q96B97 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SH3KBP1Q96B97 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SH3KBP1Q96B97 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SH3KBP1Q96B97 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
SH3KBP1Q96B97 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.79■□□□□ 0.76
SH3KBP1Q96B97 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SH3KBP1Q96B97 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SH3KBP1Q96B97 LINC01521-201ENST00000504184 1943 ntBASIC19.78■□□□□ 0.76
SH3KBP1Q96B97 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
SH3KBP1Q96B97 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SH3KBP1Q96B97 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SH3KBP1Q96B97 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SH3KBP1Q96B97 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SH3KBP1Q96B97 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SH3KBP1Q96B97 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
SH3KBP1Q96B97 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.78■□□□□ 0.76
SH3KBP1Q96B97 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.78■□□□□ 0.76
SH3KBP1Q96B97 UNC93B4-201ENST00000505679 747 ntBASIC19.78■□□□□ 0.76
SH3KBP1Q96B97 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.78■□□□□ 0.76
SH3KBP1Q96B97 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.78■□□□□ 0.76
SH3KBP1Q96B97 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SH3KBP1Q96B97 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SH3KBP1Q96B97 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SH3KBP1Q96B97 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SH3KBP1Q96B97 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SH3KBP1Q96B97 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SH3KBP1Q96B97 FEM1AP1-201ENST00000431297 1995 ntBASIC19.77■□□□□ 0.76
SH3KBP1Q96B97 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.77■□□□□ 0.76
SH3KBP1Q96B97 AC007225.1-201ENST00000566331 1836 ntBASIC19.77■□□□□ 0.76
SH3KBP1Q96B97 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SH3KBP1Q96B97 PRORSD1P-201ENST00000295112 541 ntBASIC19.77■□□□□ 0.76
SH3KBP1Q96B97 AC128676.1-201ENST00000454392 318 ntBASIC19.77■□□□□ 0.76
SH3KBP1Q96B97 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.77■□□□□ 0.76
SH3KBP1Q96B97 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.77■□□□□ 0.76
SH3KBP1Q96B97 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.77■□□□□ 0.76
SH3KBP1Q96B97 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
SH3KBP1Q96B97 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.77■□□□□ 0.76
SH3KBP1Q96B97 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SH3KBP1Q96B97 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SH3KBP1Q96B97 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SH3KBP1Q96B97 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SH3KBP1Q96B97 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SH3KBP1Q96B97 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SH3KBP1Q96B97 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SH3KBP1Q96B97 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
SH3KBP1Q96B97 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.76■□□□□ 0.75
SH3KBP1Q96B97 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SH3KBP1Q96B97 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SH3KBP1Q96B97 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SH3KBP1Q96B97 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SH3KBP1Q96B97 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SH3KBP1Q96B97 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SH3KBP1Q96B97 KRT17P3-201ENST00000420566 1262 ntBASIC19.76■□□□□ 0.75
SH3KBP1Q96B97 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.76■□□□□ 0.75
SH3KBP1Q96B97 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.76■□□□□ 0.75
SH3KBP1Q96B97 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SH3KBP1Q96B97 AC008687.6-201ENST00000596318 630 ntBASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms