Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
SCG3Q8WXD2 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
SCG3Q8WXD2 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SCG3Q8WXD2 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.44■□□□□ 0.86
SCG3Q8WXD2 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SCG3Q8WXD2 FP700111.2-201ENST00000619190 1892 ntBASIC20.44■□□□□ 0.86
SCG3Q8WXD2 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
SCG3Q8WXD2 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.44■□□□□ 0.86
SCG3Q8WXD2 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.44■□□□□ 0.86
SCG3Q8WXD2 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SCG3Q8WXD2 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SCG3Q8WXD2 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.44■□□□□ 0.86
SCG3Q8WXD2 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
SCG3Q8WXD2 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
SCG3Q8WXD2 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SCG3Q8WXD2 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
SCG3Q8WXD2 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SCG3Q8WXD2 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SCG3Q8WXD2 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SCG3Q8WXD2 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.43■□□□□ 0.86
SCG3Q8WXD2 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.43■□□□□ 0.86
SCG3Q8WXD2 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SCG3Q8WXD2 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SCG3Q8WXD2 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
SCG3Q8WXD2 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SCG3Q8WXD2 CDV3P1-201ENST00000471403 739 ntBASIC20.43■□□□□ 0.86
SCG3Q8WXD2 AC097658.1-201ENST00000475555 843 ntBASIC20.43■□□□□ 0.86
SCG3Q8WXD2 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
SCG3Q8WXD2 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SCG3Q8WXD2 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SCG3Q8WXD2 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.43■□□□□ 0.86
SCG3Q8WXD2 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SCG3Q8WXD2 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
SCG3Q8WXD2 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SCG3Q8WXD2 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SCG3Q8WXD2 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SCG3Q8WXD2 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
SCG3Q8WXD2 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
SCG3Q8WXD2 AC007322.3-201ENST00000426526 701 ntBASIC20.42■□□□□ 0.86
SCG3Q8WXD2 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.42■□□□□ 0.86
SCG3Q8WXD2 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SCG3Q8WXD2 AC098934.4-201ENST00000564127 592 ntBASIC20.42■□□□□ 0.86
SCG3Q8WXD2 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
SCG3Q8WXD2 AC020907.5-201ENST00000624372 1936 ntBASIC20.42■□□□□ 0.86
SCG3Q8WXD2 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SCG3Q8WXD2 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SCG3Q8WXD2 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
SCG3Q8WXD2 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.42■□□□□ 0.86
SCG3Q8WXD2 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.42■□□□□ 0.86
SCG3Q8WXD2 AC010980.2-201ENST00000587099 1412 ntBASIC20.42■□□□□ 0.86
SCG3Q8WXD2 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SCG3Q8WXD2 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SCG3Q8WXD2 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SCG3Q8WXD2 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SCG3Q8WXD2 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SCG3Q8WXD2 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
SCG3Q8WXD2 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
SCG3Q8WXD2 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SCG3Q8WXD2 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SCG3Q8WXD2 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.41■□□□□ 0.86
SCG3Q8WXD2 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
SCG3Q8WXD2 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
SCG3Q8WXD2 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SCG3Q8WXD2 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SCG3Q8WXD2 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SCG3Q8WXD2 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.41■□□□□ 0.86
SCG3Q8WXD2 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.41■□□□□ 0.86
SCG3Q8WXD2 RNA5SP413-201ENST00000516373 109 ntBASIC20.41■□□□□ 0.86
SCG3Q8WXD2 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.41■□□□□ 0.86
SCG3Q8WXD2 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SCG3Q8WXD2 MIR2861-201ENST00000636310 90 ntBASIC20.41■□□□□ 0.86
SCG3Q8WXD2 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SCG3Q8WXD2 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SCG3Q8WXD2 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
SCG3Q8WXD2 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.41■□□□□ 0.86
SCG3Q8WXD2 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SCG3Q8WXD2 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.41■□□□□ 0.86
SCG3Q8WXD2 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SCG3Q8WXD2 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SCG3Q8WXD2 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.4■□□□□ 0.86
SCG3Q8WXD2 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SCG3Q8WXD2 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SCG3Q8WXD2 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SCG3Q8WXD2 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.4■□□□□ 0.86
SCG3Q8WXD2 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SCG3Q8WXD2 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.4■□□□□ 0.86
SCG3Q8WXD2 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SCG3Q8WXD2 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.4■□□□□ 0.86
SCG3Q8WXD2 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SCG3Q8WXD2 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SCG3Q8WXD2 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.4■□□□□ 0.86
SCG3Q8WXD2 PCDHAC2-203ENST00000615316 3011 ntBASIC20.4■□□□□ 0.86
SCG3Q8WXD2 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SCG3Q8WXD2 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
SCG3Q8WXD2 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
SCG3Q8WXD2 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SCG3Q8WXD2 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SCG3Q8WXD2 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SCG3Q8WXD2 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SCG3Q8WXD2 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms