Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLHC1Q8NHS4 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLHC1Q8NHS4 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CLHC1Q8NHS4 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLHC1Q8NHS4 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.2■□□□□ 0.66
CLHC1Q8NHS4 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
CLHC1Q8NHS4 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLHC1Q8NHS4 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
CLHC1Q8NHS4 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLHC1Q8NHS4 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CLHC1Q8NHS4 PGM5P4-201ENST00000421970 445 ntBASIC19.2■□□□□ 0.66
CLHC1Q8NHS4 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.2■□□□□ 0.66
CLHC1Q8NHS4 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.2■□□□□ 0.66
CLHC1Q8NHS4 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CLHC1Q8NHS4 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLHC1Q8NHS4 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLHC1Q8NHS4 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CLHC1Q8NHS4 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLHC1Q8NHS4 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLHC1Q8NHS4 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.2■□□□□ 0.66
CLHC1Q8NHS4 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.2■□□□□ 0.66
CLHC1Q8NHS4 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
CLHC1Q8NHS4 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLHC1Q8NHS4 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLHC1Q8NHS4 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.19■□□□□ 0.66
CLHC1Q8NHS4 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLHC1Q8NHS4 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.19■□□□□ 0.66
CLHC1Q8NHS4 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLHC1Q8NHS4 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLHC1Q8NHS4 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.19■□□□□ 0.66
CLHC1Q8NHS4 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CLHC1Q8NHS4 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLHC1Q8NHS4 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLHC1Q8NHS4 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.19■□□□□ 0.66
CLHC1Q8NHS4 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.19■□□□□ 0.66
CLHC1Q8NHS4 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLHC1Q8NHS4 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.19■□□□□ 0.66
CLHC1Q8NHS4 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.19■□□□□ 0.66
CLHC1Q8NHS4 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.19■□□□□ 0.66
CLHC1Q8NHS4 AC011767.1-201ENST00000617410 1153 ntBASIC19.19■□□□□ 0.66
CLHC1Q8NHS4 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLHC1Q8NHS4 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CLHC1Q8NHS4 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CLHC1Q8NHS4 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLHC1Q8NHS4 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLHC1Q8NHS4 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CLHC1Q8NHS4 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLHC1Q8NHS4 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLHC1Q8NHS4 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLHC1Q8NHS4 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLHC1Q8NHS4 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CLHC1Q8NHS4 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLHC1Q8NHS4 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.18■□□□□ 0.66
CLHC1Q8NHS4 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLHC1Q8NHS4 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.18■□□□□ 0.66
CLHC1Q8NHS4 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLHC1Q8NHS4 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.18■□□□□ 0.66
CLHC1Q8NHS4 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.18■□□□□ 0.66
CLHC1Q8NHS4 AC016769.1-201ENST00000409132 1010 ntBASIC19.18■□□□□ 0.66
CLHC1Q8NHS4 KRT18P11-201ENST00000435214 1283 ntBASIC19.18■□□□□ 0.66
CLHC1Q8NHS4 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLHC1Q8NHS4 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.18■□□□□ 0.66
CLHC1Q8NHS4 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLHC1Q8NHS4 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.18■□□□□ 0.66
CLHC1Q8NHS4 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.18■□□□□ 0.66
CLHC1Q8NHS4 AIRN-201ENST00000601203 4374 ntBASIC19.18■□□□□ 0.66
CLHC1Q8NHS4 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.18■□□□□ 0.66
CLHC1Q8NHS4 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLHC1Q8NHS4 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLHC1Q8NHS4 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLHC1Q8NHS4 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLHC1Q8NHS4 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLHC1Q8NHS4 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLHC1Q8NHS4 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLHC1Q8NHS4 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
CLHC1Q8NHS4 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CLHC1Q8NHS4 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLHC1Q8NHS4 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLHC1Q8NHS4 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLHC1Q8NHS4 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLHC1Q8NHS4 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CLHC1Q8NHS4 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLHC1Q8NHS4 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.17■□□□□ 0.66
CLHC1Q8NHS4 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.17■□□□□ 0.66
CLHC1Q8NHS4 AC007322.4-201ENST00000509611 723 ntBASIC19.17■□□□□ 0.66
CLHC1Q8NHS4 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.17■□□□□ 0.66
CLHC1Q8NHS4 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.17■□□□□ 0.66
CLHC1Q8NHS4 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.17■□□□□ 0.66
CLHC1Q8NHS4 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CLHC1Q8NHS4 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLHC1Q8NHS4 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLHC1Q8NHS4 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CLHC1Q8NHS4 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLHC1Q8NHS4 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLHC1Q8NHS4 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLHC1Q8NHS4 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.16■□□□□ 0.66
CLHC1Q8NHS4 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLHC1Q8NHS4 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLHC1Q8NHS4 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLHC1Q8NHS4 AC116562.4-201ENST00000641316 2276 ntBASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms