Protein–RNA interactions for Protein: Q8NG06

TRIM58, E3 ubiquitin-protein ligase TRIM58, humanhuman

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58Q8NG06 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
TRIM58Q8NG06 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.26■□□□□ 0.99
TRIM58Q8NG06 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM58Q8NG06 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.26■□□□□ 0.99
TRIM58Q8NG06 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM58Q8NG06 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM58Q8NG06 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM58Q8NG06 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM58Q8NG06 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
TRIM58Q8NG06 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.25■□□□□ 0.99
TRIM58Q8NG06 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM58Q8NG06 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM58Q8NG06 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM58Q8NG06 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM58Q8NG06 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.25■□□□□ 0.99
TRIM58Q8NG06 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM58Q8NG06 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM58Q8NG06 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
TRIM58Q8NG06 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.25■□□□□ 0.99
TRIM58Q8NG06 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.25■□□□□ 0.99
TRIM58Q8NG06 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.25■□□□□ 0.99
TRIM58Q8NG06 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.25■□□□□ 0.99
TRIM58Q8NG06 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM58Q8NG06 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.25■□□□□ 0.99
TRIM58Q8NG06 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM58Q8NG06 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
TRIM58Q8NG06 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC21.25■□□□□ 0.99
TRIM58Q8NG06 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM58Q8NG06 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM58Q8NG06 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM58Q8NG06 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.25■□□□□ 0.99
TRIM58Q8NG06 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
TRIM58Q8NG06 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM58Q8NG06 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.25■□□□□ 0.99
TRIM58Q8NG06 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC21.25■□□□□ 0.99
TRIM58Q8NG06 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM58Q8NG06 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
TRIM58Q8NG06 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM58Q8NG06 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM58Q8NG06 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM58Q8NG06 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM58Q8NG06 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.24■□□□□ 0.99
TRIM58Q8NG06 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM58Q8NG06 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM58Q8NG06 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM58Q8NG06 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM58Q8NG06 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM58Q8NG06 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.24■□□□□ 0.99
TRIM58Q8NG06 SUDS3P1-201ENST00000505831 966 ntBASIC21.24■□□□□ 0.99
TRIM58Q8NG06 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.24■□□□□ 0.99
TRIM58Q8NG06 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM58Q8NG06 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
TRIM58Q8NG06 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM58Q8NG06 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM58Q8NG06 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM58Q8NG06 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM58Q8NG06 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM58Q8NG06 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM58Q8NG06 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.23■□□□□ 0.99
TRIM58Q8NG06 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM58Q8NG06 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM58Q8NG06 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM58Q8NG06 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC21.23■□□□□ 0.99
TRIM58Q8NG06 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC21.23■□□□□ 0.99
TRIM58Q8NG06 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
TRIM58Q8NG06 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM58Q8NG06 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC21.23■□□□□ 0.99
TRIM58Q8NG06 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM58Q8NG06 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM58Q8NG06 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.23■□□□□ 0.99
TRIM58Q8NG06 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.23■□□□□ 0.99
TRIM58Q8NG06 SLC7A5P1-201ENST00000568957 537 ntBASIC21.23■□□□□ 0.99
TRIM58Q8NG06 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC21.23■□□□□ 0.99
TRIM58Q8NG06 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM58Q8NG06 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM58Q8NG06 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM58Q8NG06 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM58Q8NG06 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC21.23■□□□□ 0.99
TRIM58Q8NG06 AC009237.14-201ENST00000609975 1594 ntBASIC21.23■□□□□ 0.99
TRIM58Q8NG06 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
TRIM58Q8NG06 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM58Q8NG06 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
TRIM58Q8NG06 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM58Q8NG06 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM58Q8NG06 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM58Q8NG06 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM58Q8NG06 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM58Q8NG06 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC21.22■□□□□ 0.99
TRIM58Q8NG06 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
TRIM58Q8NG06 STX6-204ENST00000542060 4809 ntTSL 2 BASIC21.22■□□□□ 0.99
TRIM58Q8NG06 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
TRIM58Q8NG06 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM58Q8NG06 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM58Q8NG06 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM58Q8NG06 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM58Q8NG06 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM58Q8NG06 AC027612.3-201ENST00000413684 1047 ntBASIC21.22■□□□□ 0.99
TRIM58Q8NG06 PGM5P4-201ENST00000421970 445 ntBASIC21.22■□□□□ 0.99
TRIM58Q8NG06 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.22■□□□□ 0.99
TRIM58Q8NG06 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms