Protein–RNA interactions for Protein: Q8N9W5

DNAAF3, Dynein assembly factor 3, axonemal, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF3Q8N9W5 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DNAAF3Q8N9W5 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DNAAF3Q8N9W5 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.38■□□□□ 0.85
DNAAF3Q8N9W5 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
DNAAF3Q8N9W5 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.38■□□□□ 0.85
DNAAF3Q8N9W5 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
DNAAF3Q8N9W5 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
DNAAF3Q8N9W5 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DNAAF3Q8N9W5 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.37■□□□□ 0.85
DNAAF3Q8N9W5 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
DNAAF3Q8N9W5 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
DNAAF3Q8N9W5 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.37■□□□□ 0.85
DNAAF3Q8N9W5 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.37■□□□□ 0.85
DNAAF3Q8N9W5 KRT18P68-201ENST00000392293 1000 ntBASIC20.37■□□□□ 0.85
DNAAF3Q8N9W5 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
DNAAF3Q8N9W5 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.37■□□□□ 0.85
DNAAF3Q8N9W5 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.37■□□□□ 0.85
DNAAF3Q8N9W5 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.37■□□□□ 0.85
DNAAF3Q8N9W5 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DNAAF3Q8N9W5 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.37■□□□□ 0.85
DNAAF3Q8N9W5 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
DNAAF3Q8N9W5 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
DNAAF3Q8N9W5 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
DNAAF3Q8N9W5 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.36■□□□□ 0.85
DNAAF3Q8N9W5 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.36■□□□□ 0.85
DNAAF3Q8N9W5 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.36■□□□□ 0.85
DNAAF3Q8N9W5 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
DNAAF3Q8N9W5 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
DNAAF3Q8N9W5 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
DNAAF3Q8N9W5 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
DNAAF3Q8N9W5 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DNAAF3Q8N9W5 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.36■□□□□ 0.85
DNAAF3Q8N9W5 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.36■□□□□ 0.85
DNAAF3Q8N9W5 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
DNAAF3Q8N9W5 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
DNAAF3Q8N9W5 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DNAAF3Q8N9W5 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
DNAAF3Q8N9W5 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.36■□□□□ 0.85
DNAAF3Q8N9W5 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
DNAAF3Q8N9W5 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
DNAAF3Q8N9W5 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.35■□□□□ 0.85
DNAAF3Q8N9W5 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.35■□□□□ 0.85
DNAAF3Q8N9W5 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
DNAAF3Q8N9W5 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
DNAAF3Q8N9W5 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
DNAAF3Q8N9W5 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
DNAAF3Q8N9W5 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
DNAAF3Q8N9W5 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
DNAAF3Q8N9W5 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
DNAAF3Q8N9W5 AC004911.1-201ENST00000416316 871 ntBASIC20.35■□□□□ 0.85
DNAAF3Q8N9W5 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.35■□□□□ 0.85
DNAAF3Q8N9W5 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
DNAAF3Q8N9W5 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
DNAAF3Q8N9W5 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
DNAAF3Q8N9W5 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.35■□□□□ 0.85
DNAAF3Q8N9W5 AC105020.6-201ENST00000621523 1217 ntBASIC20.35■□□□□ 0.85
DNAAF3Q8N9W5 OR10C1-204ENST00000622521 1039 ntBASIC20.35■□□□□ 0.85
DNAAF3Q8N9W5 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.35■□□□□ 0.85
DNAAF3Q8N9W5 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
DNAAF3Q8N9W5 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
DNAAF3Q8N9W5 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
DNAAF3Q8N9W5 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.35■□□□□ 0.85
DNAAF3Q8N9W5 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
DNAAF3Q8N9W5 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DNAAF3Q8N9W5 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
DNAAF3Q8N9W5 BX119927.1-201ENST00000636596 1552 ntBASIC20.34■□□□□ 0.85
DNAAF3Q8N9W5 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DNAAF3Q8N9W5 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DNAAF3Q8N9W5 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
DNAAF3Q8N9W5 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DNAAF3Q8N9W5 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.34■□□□□ 0.85
DNAAF3Q8N9W5 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.34■□□□□ 0.85
DNAAF3Q8N9W5 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
DNAAF3Q8N9W5 AL355472.2-201ENST00000422958 438 ntBASIC20.34■□□□□ 0.85
DNAAF3Q8N9W5 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.34■□□□□ 0.85
DNAAF3Q8N9W5 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.34■□□□□ 0.85
DNAAF3Q8N9W5 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.34■□□□□ 0.85
DNAAF3Q8N9W5 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.34■□□□□ 0.85
DNAAF3Q8N9W5 CYP2T3P-201ENST00000601990 817 ntBASIC20.34■□□□□ 0.85
DNAAF3Q8N9W5 AC005181.1-201ENST00000604782 1256 ntBASIC20.34■□□□□ 0.85
DNAAF3Q8N9W5 IKBKGP1-201ENST00000612193 1073 ntBASIC20.34■□□□□ 0.85
DNAAF3Q8N9W5 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
DNAAF3Q8N9W5 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
DNAAF3Q8N9W5 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
DNAAF3Q8N9W5 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
DNAAF3Q8N9W5 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
DNAAF3Q8N9W5 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
DNAAF3Q8N9W5 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DNAAF3Q8N9W5 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
DNAAF3Q8N9W5 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
DNAAF3Q8N9W5 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
DNAAF3Q8N9W5 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
DNAAF3Q8N9W5 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
DNAAF3Q8N9W5 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
DNAAF3Q8N9W5 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
DNAAF3Q8N9W5 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
DNAAF3Q8N9W5 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
DNAAF3Q8N9W5 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.33■□□□□ 0.85
DNAAF3Q8N9W5 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.33■□□□□ 0.85
DNAAF3Q8N9W5 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms