Protein–RNA interactions for Protein: Q8N9I9

DTX3, Probable E3 ubiquitin-protein ligase DTX3, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX3Q8N9I9 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.64■□□□□ 0.41
DTX3Q8N9I9 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
DTX3Q8N9I9 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DTX3Q8N9I9 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
DTX3Q8N9I9 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DTX3Q8N9I9 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
DTX3Q8N9I9 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DTX3Q8N9I9 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DTX3Q8N9I9 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
DTX3Q8N9I9 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
DTX3Q8N9I9 AC097381.1-201ENST00000429019 1296 ntBASIC17.64■□□□□ 0.41
DTX3Q8N9I9 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC17.64■□□□□ 0.41
DTX3Q8N9I9 AL358852.1-201ENST00000623174 1268 ntBASIC17.64■□□□□ 0.41
DTX3Q8N9I9 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
DTX3Q8N9I9 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.64■□□□□ 0.41
DTX3Q8N9I9 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DTX3Q8N9I9 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
DTX3Q8N9I9 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
DTX3Q8N9I9 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DTX3Q8N9I9 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DTX3Q8N9I9 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DTX3Q8N9I9 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DTX3Q8N9I9 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
DTX3Q8N9I9 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.63■□□□□ 0.41
DTX3Q8N9I9 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DTX3Q8N9I9 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DTX3Q8N9I9 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DTX3Q8N9I9 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
DTX3Q8N9I9 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DTX3Q8N9I9 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DTX3Q8N9I9 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.63■□□□□ 0.41
DTX3Q8N9I9 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DTX3Q8N9I9 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DTX3Q8N9I9 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
DTX3Q8N9I9 SLC47A1P1-202ENST00000449666 945 ntBASIC17.63■□□□□ 0.41
DTX3Q8N9I9 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DTX3Q8N9I9 AC005332.7-201ENST00000614046 2005 ntBASIC17.63■□□□□ 0.41
DTX3Q8N9I9 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
DTX3Q8N9I9 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.63■□□□□ 0.41
DTX3Q8N9I9 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
DTX3Q8N9I9 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DTX3Q8N9I9 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
DTX3Q8N9I9 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DTX3Q8N9I9 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.62■□□□□ 0.41
DTX3Q8N9I9 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
DTX3Q8N9I9 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
DTX3Q8N9I9 AC007613.1-201ENST00000572811 2597 ntBASIC17.62■□□□□ 0.41
DTX3Q8N9I9 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
DTX3Q8N9I9 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
DTX3Q8N9I9 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC17.62■□□□□ 0.41
DTX3Q8N9I9 AP005435.1-201ENST00000529293 1178 ntBASIC17.62■□□□□ 0.41
DTX3Q8N9I9 RHOF-204ENST00000537265 699 ntTSL 2 BASIC17.62■□□□□ 0.41
DTX3Q8N9I9 SMUG1P1-201ENST00000590640 811 ntBASIC17.62■□□□□ 0.41
DTX3Q8N9I9 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
DTX3Q8N9I9 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC17.62■□□□□ 0.41
DTX3Q8N9I9 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DTX3Q8N9I9 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DTX3Q8N9I9 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.62■□□□□ 0.41
DTX3Q8N9I9 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.62■□□□□ 0.41
DTX3Q8N9I9 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
DTX3Q8N9I9 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
DTX3Q8N9I9 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
DTX3Q8N9I9 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.62■□□□□ 0.41
DTX3Q8N9I9 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.62■□□□□ 0.41
DTX3Q8N9I9 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
DTX3Q8N9I9 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
DTX3Q8N9I9 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
DTX3Q8N9I9 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
DTX3Q8N9I9 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DTX3Q8N9I9 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DTX3Q8N9I9 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.61■□□□□ 0.41
DTX3Q8N9I9 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.61■□□□□ 0.41
DTX3Q8N9I9 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
DTX3Q8N9I9 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC17.61■□□□□ 0.41
DTX3Q8N9I9 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DTX3Q8N9I9 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.61■□□□□ 0.41
DTX3Q8N9I9 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DTX3Q8N9I9 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DTX3Q8N9I9 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
DTX3Q8N9I9 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
DTX3Q8N9I9 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DTX3Q8N9I9 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
DTX3Q8N9I9 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
DTX3Q8N9I9 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.61■□□□□ 0.41
DTX3Q8N9I9 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.61■□□□□ 0.41
DTX3Q8N9I9 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
DTX3Q8N9I9 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
DTX3Q8N9I9 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
DTX3Q8N9I9 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
DTX3Q8N9I9 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
DTX3Q8N9I9 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DTX3Q8N9I9 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DTX3Q8N9I9 NME4-202ENST00000382940 766 ntTSL 3 BASIC17.6■□□□□ 0.41
DTX3Q8N9I9 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DTX3Q8N9I9 AC026271.2-201ENST00000428091 497 ntBASIC17.6■□□□□ 0.41
DTX3Q8N9I9 PARL-206ENST00000435888 1098 ntTSL 5 BASIC17.6■□□□□ 0.41
DTX3Q8N9I9 IGHV3-19-201ENST00000521488 291 ntBASIC17.6■□□□□ 0.41
DTX3Q8N9I9 AL354811.1-201ENST00000610286 706 ntBASIC17.6■□□□□ 0.41
DTX3Q8N9I9 NME4-211ENST00000620944 1193 ntTSL 2 BASIC17.6■□□□□ 0.41
DTX3Q8N9I9 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms