Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.41■□□□□ 0.86
SYNPOQ8N3V7 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
SYNPOQ8N3V7 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SYNPOQ8N3V7 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.41■□□□□ 0.86
SYNPOQ8N3V7 UNC93B2-201ENST00000285383 730 ntBASIC20.41■□□□□ 0.86
SYNPOQ8N3V7 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
SYNPOQ8N3V7 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.41■□□□□ 0.86
SYNPOQ8N3V7 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.41■□□□□ 0.86
SYNPOQ8N3V7 NUDT16P1-203ENST00000513809 620 ntBASIC20.41■□□□□ 0.86
SYNPOQ8N3V7 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.41■□□□□ 0.86
SYNPOQ8N3V7 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.41■□□□□ 0.86
SYNPOQ8N3V7 RN7SL850P-201ENST00000579959 291 ntBASIC20.41■□□□□ 0.86
SYNPOQ8N3V7 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.41■□□□□ 0.86
SYNPOQ8N3V7 AL590326.2-201ENST00000625139 305 ntBASIC20.41■□□□□ 0.86
SYNPOQ8N3V7 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SYNPOQ8N3V7 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SYNPOQ8N3V7 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.41■□□□□ 0.86
SYNPOQ8N3V7 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SYNPOQ8N3V7 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SYNPOQ8N3V7 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SYNPOQ8N3V7 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SYNPOQ8N3V7 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SYNPOQ8N3V7 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SYNPOQ8N3V7 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SYNPOQ8N3V7 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SYNPOQ8N3V7 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SYNPOQ8N3V7 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SYNPOQ8N3V7 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.4■□□□□ 0.86
SYNPOQ8N3V7 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SYNPOQ8N3V7 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SYNPOQ8N3V7 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC20.4■□□□□ 0.86
SYNPOQ8N3V7 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.4■□□□□ 0.86
SYNPOQ8N3V7 KRT8P36-201ENST00000489121 1440 ntBASIC20.4■□□□□ 0.86
SYNPOQ8N3V7 AP002982.1-201ENST00000492365 877 ntBASIC20.4■□□□□ 0.86
SYNPOQ8N3V7 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.4■□□□□ 0.86
SYNPOQ8N3V7 AC005363.2-201ENST00000618631 242 ntBASIC20.4■□□□□ 0.86
SYNPOQ8N3V7 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.4■□□□□ 0.86
SYNPOQ8N3V7 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.4■□□□□ 0.86
SYNPOQ8N3V7 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SYNPOQ8N3V7 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
SYNPOQ8N3V7 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SYNPOQ8N3V7 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.39■□□□□ 0.86
SYNPOQ8N3V7 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
SYNPOQ8N3V7 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
SYNPOQ8N3V7 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SYNPOQ8N3V7 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SYNPOQ8N3V7 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.39■□□□□ 0.85
SYNPOQ8N3V7 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SYNPOQ8N3V7 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
SYNPOQ8N3V7 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SYNPOQ8N3V7 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SYNPOQ8N3V7 RBM17P1-201ENST00000453646 1190 ntBASIC20.39■□□□□ 0.85
SYNPOQ8N3V7 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SYNPOQ8N3V7 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.39■□□□□ 0.85
SYNPOQ8N3V7 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.39■□□□□ 0.85
SYNPOQ8N3V7 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.39■□□□□ 0.85
SYNPOQ8N3V7 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.39■□□□□ 0.85
SYNPOQ8N3V7 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SYNPOQ8N3V7 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SYNPOQ8N3V7 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
SYNPOQ8N3V7 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SYNPOQ8N3V7 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
SYNPOQ8N3V7 AC027702.1-201ENST00000563810 1770 ntBASIC20.39■□□□□ 0.85
SYNPOQ8N3V7 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
SYNPOQ8N3V7 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
SYNPOQ8N3V7 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.38■□□□□ 0.85
SYNPOQ8N3V7 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SYNPOQ8N3V7 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SYNPOQ8N3V7 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.38■□□□□ 0.85
SYNPOQ8N3V7 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.38■□□□□ 0.85
SYNPOQ8N3V7 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.38■□□□□ 0.85
SYNPOQ8N3V7 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SYNPOQ8N3V7 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
SYNPOQ8N3V7 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SYNPOQ8N3V7 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.38■□□□□ 0.85
SYNPOQ8N3V7 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SYNPOQ8N3V7 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SYNPOQ8N3V7 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SYNPOQ8N3V7 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
SYNPOQ8N3V7 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SYNPOQ8N3V7 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SYNPOQ8N3V7 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
SYNPOQ8N3V7 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.37■□□□□ 0.85
SYNPOQ8N3V7 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC20.37■□□□□ 0.85
SYNPOQ8N3V7 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.37■□□□□ 0.85
SYNPOQ8N3V7 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SYNPOQ8N3V7 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.37■□□□□ 0.85
SYNPOQ8N3V7 MIR6786-201ENST00000616843 113 ntBASIC20.37■□□□□ 0.85
SYNPOQ8N3V7 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SYNPOQ8N3V7 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.37■□□□□ 0.85
SYNPOQ8N3V7 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SYNPOQ8N3V7 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
SYNPOQ8N3V7 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SYNPOQ8N3V7 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
SYNPOQ8N3V7 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
SYNPOQ8N3V7 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.36■□□□□ 0.85
SYNPOQ8N3V7 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
SYNPOQ8N3V7 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
SYNPOQ8N3V7 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.36■□□□□ 0.85
SYNPOQ8N3V7 KRT18P35-201ENST00000510488 1269 ntBASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms