Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC21.7■■□□□ 1.06
VPS52Q8N1B4 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
VPS52Q8N1B4 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.7■■□□□ 1.06
VPS52Q8N1B4 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
VPS52Q8N1B4 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.7■■□□□ 1.06
VPS52Q8N1B4 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
VPS52Q8N1B4 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
VPS52Q8N1B4 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
VPS52Q8N1B4 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
VPS52Q8N1B4 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.7■■□□□ 1.06
VPS52Q8N1B4 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.69■■□□□ 1.06
VPS52Q8N1B4 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
VPS52Q8N1B4 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.69■■□□□ 1.06
VPS52Q8N1B4 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
VPS52Q8N1B4 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VPS52Q8N1B4 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VPS52Q8N1B4 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.69■■□□□ 1.06
VPS52Q8N1B4 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.69■■□□□ 1.06
VPS52Q8N1B4 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21.69■■□□□ 1.06
VPS52Q8N1B4 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
VPS52Q8N1B4 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
VPS52Q8N1B4 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC21.69■■□□□ 1.06
VPS52Q8N1B4 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC21.69■■□□□ 1.06
VPS52Q8N1B4 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC21.69■■□□□ 1.06
VPS52Q8N1B4 AL049637.2-201ENST00000641778 930 ntBASIC21.69■■□□□ 1.06
VPS52Q8N1B4 KRT17P2-201ENST00000300992 1314 ntBASIC21.69■■□□□ 1.06
VPS52Q8N1B4 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.69■■□□□ 1.06
VPS52Q8N1B4 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
VPS52Q8N1B4 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
VPS52Q8N1B4 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
VPS52Q8N1B4 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
VPS52Q8N1B4 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
VPS52Q8N1B4 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
VPS52Q8N1B4 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
VPS52Q8N1B4 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
VPS52Q8N1B4 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
VPS52Q8N1B4 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
VPS52Q8N1B4 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21.68■■□□□ 1.06
VPS52Q8N1B4 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21.68■■□□□ 1.06
VPS52Q8N1B4 AP001412.1-201ENST00000608405 714 ntBASIC21.68■■□□□ 1.06
VPS52Q8N1B4 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
VPS52Q8N1B4 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
VPS52Q8N1B4 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC21.68■■□□□ 1.06
VPS52Q8N1B4 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
VPS52Q8N1B4 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
VPS52Q8N1B4 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
VPS52Q8N1B4 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.68■■□□□ 1.06
VPS52Q8N1B4 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
VPS52Q8N1B4 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
VPS52Q8N1B4 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.68■■□□□ 1.06
VPS52Q8N1B4 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.68■■□□□ 1.06
VPS52Q8N1B4 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
VPS52Q8N1B4 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
VPS52Q8N1B4 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
VPS52Q8N1B4 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.68■■□□□ 1.06
VPS52Q8N1B4 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
VPS52Q8N1B4 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
VPS52Q8N1B4 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
VPS52Q8N1B4 BX088651.1-201ENST00000540551 451 ntBASIC21.67■■□□□ 1.06
VPS52Q8N1B4 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.67■■□□□ 1.06
VPS52Q8N1B4 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
VPS52Q8N1B4 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.67■■□□□ 1.06
VPS52Q8N1B4 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
VPS52Q8N1B4 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
VPS52Q8N1B4 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
VPS52Q8N1B4 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
VPS52Q8N1B4 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
VPS52Q8N1B4 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.67■■□□□ 1.06
VPS52Q8N1B4 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VPS52Q8N1B4 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
VPS52Q8N1B4 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VPS52Q8N1B4 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VPS52Q8N1B4 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
VPS52Q8N1B4 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
VPS52Q8N1B4 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VPS52Q8N1B4 AL135905.2-201ENST00000584934 1404 ntBASIC21.66■■□□□ 1.06
VPS52Q8N1B4 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
VPS52Q8N1B4 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.66■■□□□ 1.06
VPS52Q8N1B4 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC21.66■■□□□ 1.06
VPS52Q8N1B4 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.66■■□□□ 1.06
VPS52Q8N1B4 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.66■■□□□ 1.06
VPS52Q8N1B4 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.66■■□□□ 1.06
VPS52Q8N1B4 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.66■■□□□ 1.06
VPS52Q8N1B4 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
VPS52Q8N1B4 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
VPS52Q8N1B4 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
VPS52Q8N1B4 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
VPS52Q8N1B4 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.66■■□□□ 1.06
VPS52Q8N1B4 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
VPS52Q8N1B4 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
VPS52Q8N1B4 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
VPS52Q8N1B4 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC21.65■■□□□ 1.06
VPS52Q8N1B4 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.65■■□□□ 1.06
VPS52Q8N1B4 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
VPS52Q8N1B4 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
VPS52Q8N1B4 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC21.65■■□□□ 1.06
VPS52Q8N1B4 LINC01023-201ENST00000606054 436 ntBASIC21.65■■□□□ 1.06
VPS52Q8N1B4 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
VPS52Q8N1B4 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.65■■□□□ 1.06
VPS52Q8N1B4 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms