Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 AC080038.1-201ENST00000611274 1154 ntBASIC24.83■■□□□ 1.57
SMC5Q8IY18 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
SMC5Q8IY18 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
SMC5Q8IY18 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
SMC5Q8IY18 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
SMC5Q8IY18 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC24.83■■□□□ 1.56
SMC5Q8IY18 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
SMC5Q8IY18 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC24.83■■□□□ 1.56
SMC5Q8IY18 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
SMC5Q8IY18 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.56
SMC5Q8IY18 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.56
SMC5Q8IY18 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC24.83■■□□□ 1.56
SMC5Q8IY18 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
SMC5Q8IY18 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
SMC5Q8IY18 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
SMC5Q8IY18 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
SMC5Q8IY18 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC24.82■■□□□ 1.56
SMC5Q8IY18 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC24.82■■□□□ 1.56
SMC5Q8IY18 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
SMC5Q8IY18 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC24.82■■□□□ 1.56
SMC5Q8IY18 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC24.82■■□□□ 1.56
SMC5Q8IY18 BRWD1-AS2-201ENST00000603064 1028 ntBASIC24.82■■□□□ 1.56
SMC5Q8IY18 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC24.82■■□□□ 1.56
SMC5Q8IY18 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC24.82■■□□□ 1.56
SMC5Q8IY18 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
SMC5Q8IY18 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC24.82■■□□□ 1.56
SMC5Q8IY18 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC24.82■■□□□ 1.56
SMC5Q8IY18 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
SMC5Q8IY18 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC24.82■■□□□ 1.56
SMC5Q8IY18 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
SMC5Q8IY18 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SMC5Q8IY18 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SMC5Q8IY18 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SMC5Q8IY18 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC24.81■■□□□ 1.56
SMC5Q8IY18 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SMC5Q8IY18 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
SMC5Q8IY18 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
SMC5Q8IY18 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
SMC5Q8IY18 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC24.81■■□□□ 1.56
SMC5Q8IY18 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
SMC5Q8IY18 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC24.81■■□□□ 1.56
SMC5Q8IY18 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SMC5Q8IY18 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC24.81■■□□□ 1.56
SMC5Q8IY18 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC24.81■■□□□ 1.56
SMC5Q8IY18 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC24.81■■□□□ 1.56
SMC5Q8IY18 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC24.81■■□□□ 1.56
SMC5Q8IY18 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
SMC5Q8IY18 MARS-234ENST00000630571 216 ntTSL 5 BASIC24.81■■□□□ 1.56
SMC5Q8IY18 MARS-235ENST00000630803 183 ntTSL 3 BASIC24.81■■□□□ 1.56
SMC5Q8IY18 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
SMC5Q8IY18 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
SMC5Q8IY18 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
SMC5Q8IY18 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC24.81■■□□□ 1.56
SMC5Q8IY18 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
SMC5Q8IY18 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SMC5Q8IY18 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC24.8■■□□□ 1.56
SMC5Q8IY18 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SMC5Q8IY18 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC24.8■■□□□ 1.56
SMC5Q8IY18 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC24.8■■□□□ 1.56
SMC5Q8IY18 AC023632.3-201ENST00000521633 145 ntBASIC24.8■■□□□ 1.56
SMC5Q8IY18 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC24.8■■□□□ 1.56
SMC5Q8IY18 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
SMC5Q8IY18 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC24.8■■□□□ 1.56
SMC5Q8IY18 AC116562.4-201ENST00000641316 2276 ntBASIC24.8■■□□□ 1.56
SMC5Q8IY18 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SMC5Q8IY18 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SMC5Q8IY18 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
SMC5Q8IY18 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
SMC5Q8IY18 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SMC5Q8IY18 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
SMC5Q8IY18 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC24.79■■□□□ 1.56
SMC5Q8IY18 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
SMC5Q8IY18 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
SMC5Q8IY18 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC24.79■■□□□ 1.56
SMC5Q8IY18 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
SMC5Q8IY18 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
SMC5Q8IY18 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
SMC5Q8IY18 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC24.79■■□□□ 1.56
SMC5Q8IY18 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC24.79■■□□□ 1.56
SMC5Q8IY18 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
SMC5Q8IY18 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
SMC5Q8IY18 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
SMC5Q8IY18 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC24.79■■□□□ 1.56
SMC5Q8IY18 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
SMC5Q8IY18 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
SMC5Q8IY18 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC24.79■■□□□ 1.56
SMC5Q8IY18 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
SMC5Q8IY18 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
SMC5Q8IY18 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
SMC5Q8IY18 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC24.79■■□□□ 1.56
SMC5Q8IY18 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC24.79■■□□□ 1.56
SMC5Q8IY18 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
SMC5Q8IY18 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC24.78■■□□□ 1.56
SMC5Q8IY18 KRT16P6-202ENST00000425692 1426 ntBASIC24.78■■□□□ 1.56
SMC5Q8IY18 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC24.78■■□□□ 1.56
SMC5Q8IY18 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
SMC5Q8IY18 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC24.78■■□□□ 1.56
SMC5Q8IY18 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
SMC5Q8IY18 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC24.78■■□□□ 1.56
SMC5Q8IY18 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms