Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC25.32■■□□□ 1.64
COL23A1Q86Y22 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
COL23A1Q86Y22 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
COL23A1Q86Y22 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC25.32■■□□□ 1.64
COL23A1Q86Y22 C1QL1P1-201ENST00000568105 661 ntBASIC25.32■■□□□ 1.64
COL23A1Q86Y22 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC25.32■■□□□ 1.64
COL23A1Q86Y22 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC25.32■■□□□ 1.64
COL23A1Q86Y22 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
COL23A1Q86Y22 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC25.32■■□□□ 1.64
COL23A1Q86Y22 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
COL23A1Q86Y22 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
COL23A1Q86Y22 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC25.32■■□□□ 1.64
COL23A1Q86Y22 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
COL23A1Q86Y22 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC25.32■■□□□ 1.64
COL23A1Q86Y22 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
COL23A1Q86Y22 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
COL23A1Q86Y22 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC25.31■■□□□ 1.64
COL23A1Q86Y22 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC25.31■■□□□ 1.64
COL23A1Q86Y22 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC25.31■■□□□ 1.64
COL23A1Q86Y22 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC25.31■■□□□ 1.64
COL23A1Q86Y22 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC25.31■■□□□ 1.64
COL23A1Q86Y22 YBX1P2-201ENST00000489612 999 ntBASIC25.31■■□□□ 1.64
COL23A1Q86Y22 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC25.31■■□□□ 1.64
COL23A1Q86Y22 MIR2861-201ENST00000636310 90 ntBASIC25.31■■□□□ 1.64
COL23A1Q86Y22 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
COL23A1Q86Y22 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC25.31■■□□□ 1.64
COL23A1Q86Y22 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
COL23A1Q86Y22 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC25.31■■□□□ 1.64
COL23A1Q86Y22 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC25.31■■□□□ 1.64
COL23A1Q86Y22 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
COL23A1Q86Y22 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
COL23A1Q86Y22 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
COL23A1Q86Y22 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
COL23A1Q86Y22 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
COL23A1Q86Y22 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC25.3■■□□□ 1.64
COL23A1Q86Y22 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
COL23A1Q86Y22 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
COL23A1Q86Y22 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC25.3■■□□□ 1.64
COL23A1Q86Y22 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
COL23A1Q86Y22 HMGA1P5-201ENST00000412453 271 ntBASIC25.3■■□□□ 1.64
COL23A1Q86Y22 TSPY5P-201ENST00000426936 936 ntBASIC25.3■■□□□ 1.64
COL23A1Q86Y22 FAM86EP-206ENST00000510506 987 ntBASIC25.3■■□□□ 1.64
COL23A1Q86Y22 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
COL23A1Q86Y22 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC25.3■■□□□ 1.64
COL23A1Q86Y22 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC25.3■■□□□ 1.64
COL23A1Q86Y22 DBP-204ENST00000599385 709 ntTSL 3 BASIC25.3■■□□□ 1.64
COL23A1Q86Y22 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
COL23A1Q86Y22 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
COL23A1Q86Y22 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC25.3■■□□□ 1.64
COL23A1Q86Y22 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
COL23A1Q86Y22 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
COL23A1Q86Y22 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
COL23A1Q86Y22 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
COL23A1Q86Y22 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
COL23A1Q86Y22 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
COL23A1Q86Y22 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC25.29■■□□□ 1.64
COL23A1Q86Y22 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
COL23A1Q86Y22 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC25.29■■□□□ 1.64
COL23A1Q86Y22 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
COL23A1Q86Y22 IPPK-202ENST00000375522 882 ntTSL 3 BASIC25.29■■□□□ 1.64
COL23A1Q86Y22 PCED1CP-201ENST00000419887 785 ntBASIC25.29■■□□□ 1.64
COL23A1Q86Y22 AL450487.1-201ENST00000426799 995 ntBASIC25.29■■□□□ 1.64
COL23A1Q86Y22 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC25.29■■□□□ 1.64
COL23A1Q86Y22 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
COL23A1Q86Y22 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC25.29■■□□□ 1.64
COL23A1Q86Y22 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC25.29■■□□□ 1.64
COL23A1Q86Y22 VPS72-207ENST00000640458 689 ntTSL 5 BASIC25.29■■□□□ 1.64
COL23A1Q86Y22 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
COL23A1Q86Y22 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC25.29■■□□□ 1.64
COL23A1Q86Y22 PTBP1P-201ENST00000554374 1601 ntBASIC25.29■■□□□ 1.64
COL23A1Q86Y22 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
COL23A1Q86Y22 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
COL23A1Q86Y22 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC25.28■■□□□ 1.64
COL23A1Q86Y22 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
COL23A1Q86Y22 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
COL23A1Q86Y22 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
COL23A1Q86Y22 AC004980.1-204ENST00000429707 299 ntBASIC25.28■■□□□ 1.64
COL23A1Q86Y22 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC25.28■■□□□ 1.64
COL23A1Q86Y22 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC25.28■■□□□ 1.64
COL23A1Q86Y22 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
COL23A1Q86Y22 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
COL23A1Q86Y22 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
COL23A1Q86Y22 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
COL23A1Q86Y22 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC25.27■■□□□ 1.64
COL23A1Q86Y22 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
COL23A1Q86Y22 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
COL23A1Q86Y22 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
COL23A1Q86Y22 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC25.27■■□□□ 1.64
COL23A1Q86Y22 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC25.27■■□□□ 1.64
COL23A1Q86Y22 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
COL23A1Q86Y22 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC25.27■■□□□ 1.64
COL23A1Q86Y22 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC25.27■■□□□ 1.64
COL23A1Q86Y22 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC25.27■■□□□ 1.64
COL23A1Q86Y22 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC25.27■■□□□ 1.64
COL23A1Q86Y22 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
COL23A1Q86Y22 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC25.27■■□□□ 1.64
COL23A1Q86Y22 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
COL23A1Q86Y22 STAC-204ENST00000457375 1366 ntTSL 2 BASIC25.27■■□□□ 1.64
COL23A1Q86Y22 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
COL23A1Q86Y22 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms