Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
FOXR1Q6PIV2 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
FOXR1Q6PIV2 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
FOXR1Q6PIV2 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
FOXR1Q6PIV2 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.8■□□□□ 0.92
FOXR1Q6PIV2 AC005332.7-201ENST00000614046 2005 ntBASIC20.8■□□□□ 0.92
FOXR1Q6PIV2 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
FOXR1Q6PIV2 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
FOXR1Q6PIV2 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
FOXR1Q6PIV2 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.79■□□□□ 0.92
FOXR1Q6PIV2 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
FOXR1Q6PIV2 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
FOXR1Q6PIV2 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
FOXR1Q6PIV2 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
FOXR1Q6PIV2 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
FOXR1Q6PIV2 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
FOXR1Q6PIV2 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
FOXR1Q6PIV2 ABHD17AP1-201ENST00000358206 933 ntBASIC20.79■□□□□ 0.92
FOXR1Q6PIV2 NCF1B-203ENST00000435988 1254 ntBASIC20.79■□□□□ 0.92
FOXR1Q6PIV2 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.79■□□□□ 0.92
FOXR1Q6PIV2 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
FOXR1Q6PIV2 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.79■□□□□ 0.92
FOXR1Q6PIV2 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC20.79■□□□□ 0.92
FOXR1Q6PIV2 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.79■□□□□ 0.92
FOXR1Q6PIV2 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.79■□□□□ 0.92
FOXR1Q6PIV2 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
FOXR1Q6PIV2 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
FOXR1Q6PIV2 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.79■□□□□ 0.92
FOXR1Q6PIV2 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
FOXR1Q6PIV2 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
FOXR1Q6PIV2 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
FOXR1Q6PIV2 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
FOXR1Q6PIV2 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
FOXR1Q6PIV2 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
FOXR1Q6PIV2 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
FOXR1Q6PIV2 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
FOXR1Q6PIV2 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
FOXR1Q6PIV2 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.78■□□□□ 0.92
FOXR1Q6PIV2 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.78■□□□□ 0.92
FOXR1Q6PIV2 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
FOXR1Q6PIV2 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
FOXR1Q6PIV2 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
FOXR1Q6PIV2 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.78■□□□□ 0.92
FOXR1Q6PIV2 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
FOXR1Q6PIV2 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.78■□□□□ 0.92
FOXR1Q6PIV2 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.78■□□□□ 0.92
FOXR1Q6PIV2 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.78■□□□□ 0.92
FOXR1Q6PIV2 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.78■□□□□ 0.92
FOXR1Q6PIV2 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.78■□□□□ 0.92
FOXR1Q6PIV2 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.78■□□□□ 0.92
FOXR1Q6PIV2 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.78■□□□□ 0.92
FOXR1Q6PIV2 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
FOXR1Q6PIV2 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
FOXR1Q6PIV2 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
FOXR1Q6PIV2 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
FOXR1Q6PIV2 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
FOXR1Q6PIV2 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
FOXR1Q6PIV2 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
FOXR1Q6PIV2 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
FOXR1Q6PIV2 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
FOXR1Q6PIV2 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.77■□□□□ 0.92
FOXR1Q6PIV2 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
FOXR1Q6PIV2 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
FOXR1Q6PIV2 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
FOXR1Q6PIV2 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
FOXR1Q6PIV2 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
FOXR1Q6PIV2 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
FOXR1Q6PIV2 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
FOXR1Q6PIV2 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
FOXR1Q6PIV2 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
FOXR1Q6PIV2 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
FOXR1Q6PIV2 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
FOXR1Q6PIV2 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
FOXR1Q6PIV2 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
FOXR1Q6PIV2 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
FOXR1Q6PIV2 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC20.76■□□□□ 0.91
FOXR1Q6PIV2 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.76■□□□□ 0.91
FOXR1Q6PIV2 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
FOXR1Q6PIV2 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.76■□□□□ 0.91
FOXR1Q6PIV2 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.76■□□□□ 0.91
FOXR1Q6PIV2 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
FOXR1Q6PIV2 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
FOXR1Q6PIV2 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
FOXR1Q6PIV2 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
FOXR1Q6PIV2 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
FOXR1Q6PIV2 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.76■□□□□ 0.91
FOXR1Q6PIV2 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.76■□□□□ 0.91
FOXR1Q6PIV2 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
FOXR1Q6PIV2 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.76■□□□□ 0.91
FOXR1Q6PIV2 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
FOXR1Q6PIV2 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
FOXR1Q6PIV2 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
FOXR1Q6PIV2 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
FOXR1Q6PIV2 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FOXR1Q6PIV2 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
FOXR1Q6PIV2 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FOXR1Q6PIV2 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FOXR1Q6PIV2 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FOXR1Q6PIV2 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.75■□□□□ 0.91
FOXR1Q6PIV2 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms