Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.19■□□□□ 0.82
AP1S1P61966 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
AP1S1P61966 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
AP1S1P61966 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.19■□□□□ 0.82
AP1S1P61966 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
AP1S1P61966 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
AP1S1P61966 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
AP1S1P61966 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
AP1S1P61966 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.18■□□□□ 0.82
AP1S1P61966 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
AP1S1P61966 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
AP1S1P61966 LINC01521-201ENST00000504184 1943 ntBASIC20.18■□□□□ 0.82
AP1S1P61966 BX119927.1-201ENST00000636596 1552 ntBASIC20.18■□□□□ 0.82
AP1S1P61966 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
AP1S1P61966 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
AP1S1P61966 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
AP1S1P61966 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
AP1S1P61966 TSPY20P-201ENST00000450910 630 ntBASIC20.18■□□□□ 0.82
AP1S1P61966 FAM201B-201ENST00000458407 597 ntBASIC20.18■□□□□ 0.82
AP1S1P61966 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
AP1S1P61966 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.18■□□□□ 0.82
AP1S1P61966 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
AP1S1P61966 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
AP1S1P61966 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
AP1S1P61966 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.18■□□□□ 0.82
AP1S1P61966 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
AP1S1P61966 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
AP1S1P61966 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.18■□□□□ 0.82
AP1S1P61966 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
AP1S1P61966 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.17■□□□□ 0.82
AP1S1P61966 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
AP1S1P61966 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
AP1S1P61966 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
AP1S1P61966 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
AP1S1P61966 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
AP1S1P61966 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.17■□□□□ 0.82
AP1S1P61966 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
AP1S1P61966 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
AP1S1P61966 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.17■□□□□ 0.82
AP1S1P61966 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
AP1S1P61966 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
AP1S1P61966 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.17■□□□□ 0.82
AP1S1P61966 POM121L13P-201ENST00000422362 380 ntBASIC20.17■□□□□ 0.82
AP1S1P61966 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.17■□□□□ 0.82
AP1S1P61966 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.17■□□□□ 0.82
AP1S1P61966 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
AP1S1P61966 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.17■□□□□ 0.82
AP1S1P61966 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.17■□□□□ 0.82
AP1S1P61966 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.17■□□□□ 0.82
AP1S1P61966 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
AP1S1P61966 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
AP1S1P61966 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
AP1S1P61966 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.17■□□□□ 0.82
AP1S1P61966 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
AP1S1P61966 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
AP1S1P61966 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
AP1S1P61966 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
AP1S1P61966 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
AP1S1P61966 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.17■□□□□ 0.82
AP1S1P61966 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
AP1S1P61966 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
AP1S1P61966 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
AP1S1P61966 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.16■□□□□ 0.82
AP1S1P61966 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.16■□□□□ 0.82
AP1S1P61966 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.16■□□□□ 0.82
AP1S1P61966 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
AP1S1P61966 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
AP1S1P61966 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.16■□□□□ 0.82
AP1S1P61966 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
AP1S1P61966 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.16■□□□□ 0.82
AP1S1P61966 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
AP1S1P61966 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.16■□□□□ 0.82
AP1S1P61966 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
AP1S1P61966 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
AP1S1P61966 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
AP1S1P61966 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
AP1S1P61966 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
AP1S1P61966 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.15■□□□□ 0.82
AP1S1P61966 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
AP1S1P61966 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
AP1S1P61966 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
AP1S1P61966 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
AP1S1P61966 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.15■□□□□ 0.82
AP1S1P61966 KRT17P3-201ENST00000420566 1262 ntBASIC20.15■□□□□ 0.82
AP1S1P61966 RPS2P52-201ENST00000469610 820 ntBASIC20.15■□□□□ 0.82
AP1S1P61966 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.15■□□□□ 0.82
AP1S1P61966 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.15■□□□□ 0.82
AP1S1P61966 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
AP1S1P61966 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
AP1S1P61966 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
AP1S1P61966 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
AP1S1P61966 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
AP1S1P61966 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
AP1S1P61966 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.14■□□□□ 0.81
AP1S1P61966 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
AP1S1P61966 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
AP1S1P61966 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
AP1S1P61966 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.14■□□□□ 0.81
AP1S1P61966 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
AP1S1P61966 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms