Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
EPHB3P54753 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC21■□□□□ 0.95
EPHB3P54753 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC21■□□□□ 0.95
EPHB3P54753 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC21■□□□□ 0.95
EPHB3P54753 F2R-202ENST00000505600 442 ntTSL 2 BASIC21■□□□□ 0.95
EPHB3P54753 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
EPHB3P54753 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21■□□□□ 0.95
EPHB3P54753 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC21■□□□□ 0.95
EPHB3P54753 AC004264.1-201ENST00000608354 794 ntBASIC21■□□□□ 0.95
EPHB3P54753 KRT8P17-201ENST00000453110 1448 ntBASIC21■□□□□ 0.95
EPHB3P54753 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
EPHB3P54753 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
EPHB3P54753 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC21■□□□□ 0.95
EPHB3P54753 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
EPHB3P54753 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21■□□□□ 0.95
EPHB3P54753 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
EPHB3P54753 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.99■□□□□ 0.95
EPHB3P54753 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.99■□□□□ 0.95
EPHB3P54753 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
EPHB3P54753 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
EPHB3P54753 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
EPHB3P54753 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
EPHB3P54753 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.99■□□□□ 0.95
EPHB3P54753 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
EPHB3P54753 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
EPHB3P54753 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
EPHB3P54753 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
EPHB3P54753 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.99■□□□□ 0.95
EPHB3P54753 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.99■□□□□ 0.95
EPHB3P54753 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
EPHB3P54753 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
EPHB3P54753 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.99■□□□□ 0.95
EPHB3P54753 HTR7P1-201ENST00000538670 1336 ntBASIC20.99■□□□□ 0.95
EPHB3P54753 LINC00565-201ENST00000562710 2331 ntBASIC20.99■□□□□ 0.95
EPHB3P54753 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
EPHB3P54753 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
EPHB3P54753 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
EPHB3P54753 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
EPHB3P54753 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.98■□□□□ 0.95
EPHB3P54753 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
EPHB3P54753 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
EPHB3P54753 AL353807.1-201ENST00000427475 662 ntBASIC20.98■□□□□ 0.95
EPHB3P54753 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.98■□□□□ 0.95
EPHB3P54753 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
EPHB3P54753 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.98■□□□□ 0.95
EPHB3P54753 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.98■□□□□ 0.95
EPHB3P54753 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
EPHB3P54753 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
EPHB3P54753 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
EPHB3P54753 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
EPHB3P54753 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.97■□□□□ 0.95
EPHB3P54753 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.97■□□□□ 0.95
EPHB3P54753 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.97■□□□□ 0.95
EPHB3P54753 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.97■□□□□ 0.95
EPHB3P54753 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
EPHB3P54753 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.97■□□□□ 0.95
EPHB3P54753 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
EPHB3P54753 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
EPHB3P54753 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
EPHB3P54753 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
EPHB3P54753 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.97■□□□□ 0.95
EPHB3P54753 BX088651.1-201ENST00000540551 451 ntBASIC20.97■□□□□ 0.95
EPHB3P54753 AF186192.3-201ENST00000583427 947 ntBASIC20.97■□□□□ 0.95
EPHB3P54753 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
EPHB3P54753 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.97■□□□□ 0.95
EPHB3P54753 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.97■□□□□ 0.95
EPHB3P54753 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.97■□□□□ 0.95
EPHB3P54753 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
EPHB3P54753 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
EPHB3P54753 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.96■□□□□ 0.95
EPHB3P54753 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
EPHB3P54753 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.96■□□□□ 0.95
EPHB3P54753 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.96■□□□□ 0.95
EPHB3P54753 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.96■□□□□ 0.95
EPHB3P54753 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.96■□□□□ 0.95
EPHB3P54753 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
EPHB3P54753 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
EPHB3P54753 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
EPHB3P54753 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.96■□□□□ 0.95
EPHB3P54753 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
EPHB3P54753 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
EPHB3P54753 AC026310.3-201ENST00000625186 2373 ntBASIC20.95■□□□□ 0.94
EPHB3P54753 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
EPHB3P54753 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
EPHB3P54753 AC005229.4-201ENST00000610085 2198 ntBASIC20.95■□□□□ 0.94
EPHB3P54753 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.95■□□□□ 0.94
EPHB3P54753 AC211429.1-201ENST00000415277 523 ntBASIC20.95■□□□□ 0.94
EPHB3P54753 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
EPHB3P54753 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
EPHB3P54753 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.95■□□□□ 0.94
EPHB3P54753 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.95■□□□□ 0.94
EPHB3P54753 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
EPHB3P54753 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
EPHB3P54753 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.95■□□□□ 0.94
EPHB3P54753 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
EPHB3P54753 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
EPHB3P54753 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.95■□□□□ 0.94
EPHB3P54753 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.95■□□□□ 0.94
EPHB3P54753 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.95■□□□□ 0.94
EPHB3P54753 AC007225.1-201ENST00000566331 1836 ntBASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms